An07g06750 (Aspergillus niger)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 CADANGAG00005948 T02054_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00005830 CCCH ZF 1 22

Links

Other CCCH ZF family RBPs
Other Aspergillus niger RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ANIA_04595 Aspergillus nidulans CADANIAG00005841 N 0.913
fgenesh1_pg.00009_#_218 Aspergillus carbonarius fgenesh1_pg.00009_#_218 N 0.864
NFIA_034530 Neosartorya fischeri CADNFIAG00002955 N 0.826
AFUA_2G02160 Aspergillus fumigatus CADAFUAG00003346 N 0.783
Pc20g04370 Penicillium chrysogenum Pc20g04370 N 0.783
CIMG_05516 Coccidioides immitis CIMG_05516 N 0.783
AFLA_043160 Aspergillus flavus CADAFLAG00005643 N 0.739
ACLA_092660 Aspergillus clavatus CADACLAG00008386 N 0.727