VDAG_06648 (Verticillium dahliae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 VDAG_06648 T31416_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
VDAG_06648T0 RRM 113 167
VDAG_06648T0 RRM 188 258
VDAG_06648T0 RRM 314 378

Links

Other RRM family RBPs
Other Verticillium dahliae RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A6QP83_BOVIN Bos taurus ENSBTAG00000013072 N 0.000
AAH60400 Xenopus laevis AAH60400 N 0.000
Ame_R003042 Ailuropoda melanoleuca Ame_R003042 N 0.000
ENSDARG00000007049 Danio rerio ENSDARG00000007049 N 0.000
ENSPPYG00000019693 Pongo pygmaeus ENSPPYG00000019693 N 0.000
FUBP3 Ornithorhynchus anatinus ENSOANG00000001042 N 0.000
FUBP3 Oryzias latipes ENSORLG00000007103 N 0.000
FUBP3 Oryzias latipes ENSORLG00000017565 N 0.000
FUBP3 Procavia capensis ENSPCAG00000001717 N 0.000
FUBP3 Pan troglodytes ENSPTRG00000021474 N 0.000
FUBP3 Pteropus vampyrus ENSPVAG00000001510 N 0.000
Fubp3 Rattus norvegicus ENSRNOG00000009139 N 0.000
FUBP3 Taeniopygia guttata ENSTGUG00000004662 N 0.000
FUBP3 Tetraodon nigroviridis ENSTNIG00000005858 N 0.000
FUBP3 Tetraodon nigroviridis ENSTNIG00000009019 N 0.000
FUBP3 Takifugu rubripes ENSTRUG00000013259 N 0.000
FUBP3 Takifugu rubripes ENSTRUG00000018658 N 0.000
fubp3 Xenopus tropicalis ENSXETG00000001344 N 0.000
FUBP3 Ochotona princeps ENSOPRG00000008648 N 0.000
FUBP3 Otolemur garnettii ENSOGAG00000007555 N 0.000
FUBP3 Canis familiaris ENSCAFG00000019942 N 0.000
FUBP3 Cavia porcellus ENSCPOG00000010315 N 0.000
FUBP3 Dasypus novemcinctus ENSDNOG00000014533 N 0.000
FUBP3 Felis catus ENSFCAG00000005113 N 0.000
FUBP3 Homo sapiens ENSG00000107164 N 0.000
FUBP3 Gorilla gorilla ENSGGOG00000011318 N 0.000
FUBP3 Loxodonta africana ENSLAFG00000011611 N 0.000
FUBP3 Meleagris gallopavo ENSMGAG00000005342 N 0.000
FUBP3 Microcebus murinus ENSMICG00000015452 N 0.000
FUBP3 Myotis lucifugus ENSMLUG00000008743 N 0.000
FUBP3 Macaca mulatta ENSMMUG00000008249 N 0.000
FUBP3 Monodelphis domestica ENSMODG00000012105 N 0.000
Fubp3 Mus musculus ENSMUSG00000026843 N 0.000
LOC100069755 Equus caballus ENSECAG00000011500 N 0.000
LOC100399862 Callithrix jacchus ENSCJAG00000020542 N 0.000
Q5ZM76_CHICK Gallus gallus ENSGALG00000003941 N 0.000