VDAG_06648 (Verticillium dahliae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 VDAG_06648 T31416_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
VDAG_06648T0 RRM 113 167
VDAG_06648T0 RRM 188 258
VDAG_06648T0 RRM 314 378

Links

Other RRM family RBPs
Other Verticillium dahliae RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ATEG_00398 Aspergillus terreus CADATEAG00007828 N 0.701
CHGG_05573 Chaetomium globosum CHGG_05573 N 0.817
CIMG_09023 Coccidioides immitis CIMG_09023 N 0.706
estExt_fgenesh1_kg.C_40363 Myceliophthora thermophila estExt_fgenesh1_kg.C_40363 N 0.706
estExt_fgenesh1_pg.C_90049 Trichoderma atroviride estExt_fgenesh1_pg.C_90049 N 0.719
estExt_fgenesh3_kg.C_200038 Neurospora discreta estExt_fgenesh3_kg.C_200038 N 0.729
estExt_Genewise1Plus.C_11264 Cryphonectria parasitica estExt_Genewise1Plus.C_11264 N 0.706
estExt_Genewise1Plus.C_32201 Thielavia terrestris estExt_Genewise1Plus.C_32201 N 0.706
estExt_Genewise1Plus.C_sca_10_chr8_2_00705 Nectria haematococca estExt_Genewise1Plus.C_sca_10_chr8_2_00705 N 0.733
estExt_GeneWisePlus.C_11433 Trichoderma reesei estExt_GeneWisePlus.C_11433 N 0.738
e_gw1.32.97.1 Trichoderma virens e_gw1.32.97.1 N 0.738
FGSG_05417 Fusarium graminearum FGSG_05417 N 0.724
FOXG_09482 Fusarium oxysporum FOXG_09482 N 0.733
FVEG_07111 Fusarium verticillioides FVEG_07111 N 0.733
GLRG_08449 Colletotrichum graminicola GLRG_08449 N 0.742
NCU07874 Neurospora crassa NCU07874 N 0.719
Pa_7_10990 Podospora anserina Pa_7_10990 N 0.710
VDBG_07004 Verticillium albo atrum VDBG_07004 N 0.747