HNRPDL (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000004101 T35502_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000007446 RRM 50 119
ENSCJAP00000007446 RRM 135 189

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

51 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A4IF81_BOVIN Bos taurus ENSBTAG00000014804 I 0.836
AAH45124 Xenopus laevis AAH45124 N 0.770
AAH68788 Xenopus laevis AAH68788 N 0.777
Ame_R000242 Ailuropoda melanoleuca Ame_R000242 I 0.836
CBF67671 Xenopus laevis CBF67671 N 0.777
CBU92545 Xenopus laevis CBU92545 N 0.777
D3ZN89_RAT Rattus norvegicus ENSRNOG00000002270 I 0.836
ENSCAFG00000005858 Canis familiaris ENSCAFG00000005858 N 0.786
ENSCAFG00000008940 Canis familiaris ENSCAFG00000008940 I 0.836
ENSCHOG00000000160 Choloepus hoffmanni ENSCHOG00000000160 I 0.836
ENSCHOG00000002938 Choloepus hoffmanni ENSCHOG00000002938 N 0.807
ENSCHOG00000003275 Choloepus hoffmanni ENSCHOG00000003275 N 0.786
ENSCHOG00000009204 Choloepus hoffmanni ENSCHOG00000009204 N 0.741
ENSCHOG00000010831 Choloepus hoffmanni ENSCHOG00000010831 N 0.814
ENSCPOG00000015619 Cavia porcellus ENSCPOG00000015619 I 0.836
ENSDNOG00000003887 Dasypus novemcinctus ENSDNOG00000003887 I 0.836
ENSDORG00000000968 Dipodomys ordii ENSDORG00000000968 I 0.836
ENSLAFG00000008612 Loxodonta africana ENSLAFG00000008612 I 0.836
ENSMEUG00000011454 Macropus eugenii ENSMEUG00000011454 I 0.836
ENSMODG00000006825 Monodelphis domestica ENSMODG00000006825 I 0.814
ENSMODG00000011916 Monodelphis domestica ENSMODG00000011916 I 0.836
ENSPPYG00000014886 Pongo pygmaeus ENSPPYG00000014886 I 0.836
HNRDL_CHICK Gallus gallus ENSGALG00000023199 I 0.829
HNRPDL Procavia capensis ENSPCAG00000011543 I 0.836
HNRPDL Pan troglodytes ENSPTRG00000016217 I 0.836
HNRPDL Tupaia belangeri ENSTBEG00000002817 I 0.836
HNRPDL Taeniopygia guttata ENSTGUG00000002850 I 0.829
HNRPDL Tursiops truncatus ENSTTRG00000001793 I 0.829
HNRPDL Vicugna pacos ENSVPAG00000002422 N 0.720
hnrpdl Xenopus tropicalis ENSXETG00000023026 I 0.791
HNRPDL Spermophilus tridecemlineatus ENSSTOG00000013979 I 0.836
HNRPDL Ochotona princeps ENSOPRG00000007178 I 0.836
HNRPDL Otolemur garnettii ENSOGAG00000002501 N 0.807
HNRPDL Oryctolagus cuniculus ENSOCUG00000013805 I 0.836
hnrpdl Danio rerio ENSDARG00000003429 N 0.707
HNRPDL Erinaceus europaeus ENSEEUG00000004301 I 0.829
HNRPDL Felis catus ENSFCAG00000000455 N 0.786
HNRPDL Homo sapiens ENSG00000152795 I 0.836
HNRPDL Gorilla gorilla ENSGGOG00000003714 I 0.836
HNRPDL Macropus eugenii ENSMEUG00000010033 N 0.738
HNRPDL Meleagris gallopavo ENSMGAG00000008033 I 0.829
HNRPDL Microcebus murinus ENSMICG00000001445 I 0.836
HNRPDL Myotis lucifugus ENSMLUG00000014452 I 0.821
HNRPDL Macaca mulatta ENSMMUG00000015777 I 0.836
Hnrpdl Mus musculus ENSMUSG00000029328 I 0.836
HNRPDL Ornithorhynchus anatinus ENSOANG00000004651 I 0.836
LOC100404672 Callithrix jacchus ENSCJAG00000005154 I 0.821
LOC100412686 Callithrix jacchus ENSCJAG00000015197 I 0.836
Q6NU14 Xenopus laevis Q6NU14 N 0.777
Q6X9Z3_HORSE Equus caballus ENSECAG00000022692 I 0.836
Q7ZX83 Xenopus laevis Q7ZX83 N 0.770