ENSMODG00000006825 (Monodelphis domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMODG00000006825 T39098_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPAB
M210_0.6 		Tetraodon nigroviridis WRGWUAG RNAcompete
Ray et al.(2013)
RNCMPT00245 		0.707
HNRNPAB
M301_0.6 		Homo sapiens Sequence logo not available ACAAAGACAAA SELEX
Cook et al.(2011)
39_12419250 		0.700
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000008450 RRM 31 100
ENSMODP00000008450 RRM 116 185

Links

Other RRM family RBPs
Other Monodelphis domestica RBPs

107 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSMEUG00000011454 Macropus eugenii ENSMEUG00000011454 I 0.971
ENSMODG00000011916 Monodelphis domestica ENSMODG00000011916 I 0.971
Q6X9Z3_HORSE Equus caballus ENSECAG00000022692 I 0.964
A4IF81_BOVIN Bos taurus ENSBTAG00000014804 I 0.964
D3ZN89_RAT Rattus norvegicus ENSRNOG00000002270 I 0.964
HNRPDL Gorilla gorilla ENSGGOG00000003714 I 0.964
HNRPDL Tupaia belangeri ENSTBEG00000002817 I 0.964
HNRPDL Homo sapiens ENSG00000152795 I 0.964
ENSDNOG00000003887 Dasypus novemcinctus ENSDNOG00000003887 I 0.964
ENSCHOG00000000160 Choloepus hoffmanni ENSCHOG00000000160 I 0.964
ENSCAFG00000008940 Canis familiaris ENSCAFG00000008940 I 0.964
Ame_R000242 Ailuropoda melanoleuca Ame_R000242 I 0.964
LOC100412686 Callithrix jacchus ENSCJAG00000015197 I 0.964
HNRPDL Pan troglodytes ENSPTRG00000016217 I 0.964
ENSCPOG00000015619 Cavia porcellus ENSCPOG00000015619 I 0.964
ENSDORG00000000968 Dipodomys ordii ENSDORG00000000968 I 0.964
HNRPDL Spermophilus tridecemlineatus ENSSTOG00000013979 I 0.964
ENSLAFG00000008612 Loxodonta africana ENSLAFG00000008612 I 0.964
HNRPDL Oryctolagus cuniculus ENSOCUG00000013805 I 0.964
HNRPDL Ornithorhynchus anatinus ENSOANG00000004651 I 0.964
Hnrpdl Mus musculus ENSMUSG00000029328 I 0.964
HNRPDL Macaca mulatta ENSMMUG00000015777 I 0.964
HNRPDL Ochotona princeps ENSOPRG00000007178 I 0.964
HNRPDL Microcebus murinus ENSMICG00000001445 I 0.964
HNRPDL Procavia capensis ENSPCAG00000011543 I 0.964
ENSPPYG00000014886 Pongo pygmaeus ENSPPYG00000014886 I 0.964
HNRPDL Tursiops truncatus ENSTTRG00000001793 I 0.957
HNRPDL Taeniopygia guttata ENSTGUG00000002850 I 0.957
HNRDL_CHICK Gallus gallus ENSGALG00000023199 I 0.957
HNRPDL Meleagris gallopavo ENSMGAG00000008033 I 0.957
HNRPDL Erinaceus europaeus ENSEEUG00000004301 I 0.950
HNRPDL Myotis lucifugus ENSMLUG00000014452 I 0.950
LOC100404672 Callithrix jacchus ENSCJAG00000005154 I 0.950
ENSCHOG00000002938 Choloepus hoffmanni ENSCHOG00000002938 N 0.943
ENSCHOG00000010831 Choloepus hoffmanni ENSCHOG00000010831 N 0.936
HNRPDL Otolemur garnettii ENSOGAG00000002501 N 0.929
HNRPDL Felis catus ENSFCAG00000000455 N 0.921
ENSCHOG00000003275 Choloepus hoffmanni ENSCHOG00000003275 N 0.914
ENSCAFG00000005858 Canis familiaris ENSCAFG00000005858 N 0.907
Q6NU14 Xenopus laevis Q6NU14 N 0.886
AAH68788 Xenopus laevis AAH68788 N 0.886
CBU92545 Xenopus laevis CBU92545 N 0.886
CBF67671 Xenopus laevis CBF67671 N 0.886
hnrpdl Xenopus tropicalis ENSXETG00000023026 I 0.886
AAH45124 Xenopus laevis AAH45124 N 0.871
Q7ZX83 Xenopus laevis Q7ZX83 N 0.871
hnrpdl Danio rerio ENSDARG00000003429 N 0.850
ENSCHOG00000009204 Choloepus hoffmanni ENSCHOG00000009204 N 0.843
HNRPDL Macropus eugenii ENSMEUG00000010033 N 0.824
HNRPDL Callithrix jacchus ENSCJAG00000004101 N 0.814
HNRPDL Pteropus vampyrus ENSPVAG00000006816 N 0.800
HNRNPAB Oryzias latipes ENSORLG00000005327 I 0.729
HNRNPAB Takifugu rubripes ENSTRUG00000000612 I 0.721
HNRPDL Sorex araneus ENSSARG00000009961 N 0.721
hnrnpab Xenopus tropicalis ENSXETG00000003836 I 0.721
HNRNPAB Anolis carolinensis ENSACAG00000016946 I 0.714
Q5ZIH1_CHICK Gallus gallus ENSGALG00000011184 I 0.713
HNRNPD Ornithorhynchus anatinus ENSOANG00000001932 I 0.713
HNRNPD Meleagris gallopavo ENSMGAG00000008051 I 0.713
HNRNPD Homo sapiens ENSG00000138668 I 0.711
HNRNPD Tursiops truncatus ENSTTRG00000007592 I 0.711
HNRNPD Echinops telfairi ENSETEG00000016709 I 0.711
A5D9H5_BOVIN Bos taurus ENSBTAG00000013952 I 0.711
LOC100060733 Equus caballus ENSECAG00000009344 I 0.711
HNRNPD Taeniopygia guttata ENSTGUG00000002858 I 0.711
HNRNPD Gorilla gorilla ENSGGOG00000026760 I 0.711
LOC100400250 Callithrix jacchus ENSCJAG00000015165 I 0.711
HNRNPD Ochotona princeps ENSOPRG00000009336 I 0.711
HNRNPD Canis familiaris ENSCAFG00000025045 I 0.711
HNRNPD Monodelphis domestica ENSMODG00000011898 I 0.711
HNRNPD Macaca mulatta ENSMMUG00000014030 I 0.711
Hnrnpd Mus musculus ENSMUSG00000000568 I 0.711
HNRNPD Pan troglodytes ENSPTRG00000016215 I 0.711
HNRNPD Pteropus vampyrus ENSPVAG00000000003 I 0.711
ENSPPYG00000014885 Pongo pygmaeus ENSPPYG00000014885 I 0.711
hnrnpd Xenopus tropicalis ENSXETG00000012569 I 0.711
HNRNPD Spermophilus tridecemlineatus ENSSTOG00000013970 I 0.711
HNRNPAB Gasterosteus aculeatus ENSGACG00000020830 I 0.707
HNRNPAB Tetraodon nigroviridis ENSTNIG00000010512 D 0.707
AAH43814 Xenopus laevis AAH43814 I 0.707
Ame_R012484 Ailuropoda melanoleuca Ame_R012484 I 0.707
AAH74212 Xenopus laevis AAH74212 I 0.707
HNRNPAB Macaca mulatta ENSMMUG00000003996 I 0.707
ABV54637 Xenopus laevis ABV54637 I 0.707
HNRNPD Loxodonta africana ENSLAFG00000016483 I 0.706
Ame_R000243 Ailuropoda melanoleuca Ame_R000243 I 0.706
HNRNPD Microcebus murinus ENSMICG00000010984 I 0.706
HNRNPD Oryctolagus cuniculus ENSOCUG00000001357 I 0.706
HNRNPD Tarsius syrichta ENSTSYG00000010395 I 0.706
LOC100397832 Callithrix jacchus ENSCJAG00000031195 I 0.706
HNRNPD Vicugna pacos ENSVPAG00000004374 I 0.706
HNRNPD Anolis carolinensis ENSACAG00000010342 I 0.706
Hnrpd Rattus norvegicus ENSRNOG00000002292 I 0.704
HNRNPD Erinaceus europaeus ENSEEUG00000007552 I 0.702
HNRNPD Sorex araneus ENSSARG00000006883 I 0.702
HNRNPAB Dasypus novemcinctus ENSDNOG00000013820 I 0.700
ENSECAG00000018242 Equus caballus ENSECAG00000018242 I 0.700
HNRNPAB Cavia porcellus ENSCPOG00000025972 I 0.700
Q3ZC44_BOVIN Bos taurus ENSBTAG00000013627 I 0.700
HNRNPAB Canis familiaris ENSCAFG00000000241 I 0.700
ENSSSCG00000012473 Sus scrofa ENSSSCG00000012473 N 0.700
HNRNPAB Loxodonta africana ENSLAFG00000001189 I 0.700
XR_022913.1 Pan troglodytes ENSPTRG00000017601 I 0.700
HNRNPAB Gasterosteus aculeatus ENSGACG00000018116 I 0.700
HNRNPAB Homo sapiens ENSG00000197451 D 0.700
HNRNPAB Ochotona princeps ENSOPRG00000002546 I 0.700
HNRNPAB Gorilla gorilla ENSGGOG00000011692 I 0.700