CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRPDL
(
Felis catus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSFCAG00000000455
T37032_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000000422
RRM
150
219
MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLID
ENSFCAP00000000422
RRM
236
303
FVGGMSPDSEEPIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCE
Links
Other
RRM
family RBPs
Other
Felis catus
RBPs
53 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R000242
Ailuropoda melanoleuca
Ame_R000242
I
0.950
HNRPDL
Procavia capensis
ENSPCAG00000011543
I
0.950
HNRPDL
Ochotona princeps
ENSOPRG00000007178
I
0.950
A4IF81_BOVIN
Bos taurus
ENSBTAG00000014804
I
0.950
HNRPDL
Oryctolagus cuniculus
ENSOCUG00000013805
I
0.950
ENSPPYG00000014886
Pongo pygmaeus
ENSPPYG00000014886
I
0.950
HNRPDL
Pan troglodytes
ENSPTRG00000016217
I
0.950
HNRPDL
Tupaia belangeri
ENSTBEG00000002817
I
0.950
HNRPDL
Spermophilus tridecemlineatus
ENSSTOG00000013979
I
0.950
D3ZN89_RAT
Rattus norvegicus
ENSRNOG00000002270
I
0.950
HNRPDL
Homo sapiens
ENSG00000152795
I
0.950
HNRPDL
Ornithorhynchus anatinus
ENSOANG00000004651
I
0.950
Hnrpdl
Mus musculus
ENSMUSG00000029328
I
0.950
ENSDORG00000000968
Dipodomys ordii
ENSDORG00000000968
I
0.950
ENSDNOG00000003887
Dasypus novemcinctus
ENSDNOG00000003887
I
0.950
ENSLAFG00000008612
Loxodonta africana
ENSLAFG00000008612
I
0.950
HNRPDL
Gorilla gorilla
ENSGGOG00000003714
I
0.950
Q6X9Z3_HORSE
Equus caballus
ENSECAG00000022692
I
0.950
ENSCPOG00000015619
Cavia porcellus
ENSCPOG00000015619
I
0.950
HNRPDL
Microcebus murinus
ENSMICG00000001445
I
0.950
ENSCAFG00000008940
Canis familiaris
ENSCAFG00000008940
I
0.950
ENSCHOG00000000160
Choloepus hoffmanni
ENSCHOG00000000160
I
0.950
HNRPDL
Macaca mulatta
ENSMMUG00000015777
I
0.950
LOC100412686
Callithrix jacchus
ENSCJAG00000015197
I
0.950
HNRPDL
Taeniopygia guttata
ENSTGUG00000002850
I
0.943
HNRPDL
Tursiops truncatus
ENSTTRG00000001793
I
0.943
HNRPDL
Meleagris gallopavo
ENSMGAG00000008033
I
0.943
ENSMODG00000011916
Monodelphis domestica
ENSMODG00000011916
I
0.943
ENSMEUG00000011454
Macropus eugenii
ENSMEUG00000011454
I
0.943
HNRDL_CHICK
Gallus gallus
ENSGALG00000023199
I
0.943
LOC100404672
Callithrix jacchus
ENSCJAG00000005154
I
0.936
HNRPDL
Myotis lucifugus
ENSMLUG00000014452
I
0.936
HNRPDL
Erinaceus europaeus
ENSEEUG00000004301
I
0.936
ENSCHOG00000010831
Choloepus hoffmanni
ENSCHOG00000010831
N
0.921
ENSMODG00000006825
Monodelphis domestica
ENSMODG00000006825
I
0.921
ENSCHOG00000003275
Choloepus hoffmanni
ENSCHOG00000003275
N
0.914
HNRPDL
Otolemur garnettii
ENSOGAG00000002501
N
0.914
ENSCHOG00000002938
Choloepus hoffmanni
ENSCHOG00000002938
N
0.914
ENSCAFG00000005858
Canis familiaris
ENSCAFG00000005858
N
0.900
hnrpdl
Xenopus tropicalis
ENSXETG00000023026
I
0.871
CBF67671
Xenopus laevis
CBF67671
N
0.864
AAH68788
Xenopus laevis
AAH68788
N
0.864
CBU92545
Xenopus laevis
CBU92545
N
0.864
Q6NU14
Xenopus laevis
Q6NU14
N
0.864
Q7ZX83
Xenopus laevis
Q7ZX83
N
0.850
AAH45124
Xenopus laevis
AAH45124
N
0.850
HNRPDL
Pteropus vampyrus
ENSPVAG00000006816
N
0.841
ENSCHOG00000009204
Choloepus hoffmanni
ENSCHOG00000009204
N
0.829
hnrpdl
Danio rerio
ENSDARG00000003429
N
0.814
HNRPDL
Macropus eugenii
ENSMEUG00000010033
N
0.796
HNRPDL
Callithrix jacchus
ENSCJAG00000004101
N
0.786
HNRNPAB
Oryzias latipes
ENSORLG00000005327
I
0.707
hnrnpab
Xenopus tropicalis
ENSXETG00000003836
I
0.700