CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSETEG00000012394
(
Echinops telfairi
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSETEG00000012394
T36963_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000010050
RRM
15
59
LFIGGLSFETTDESLWSHGEPWGLTDCVVMRDPNTKRSRGCGSVW
ENSETEP00000010050
RRM
98
165
IFVGGIKEDPEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRSFAFVTFDDRDSGVKVVLQKYHTENGHS
Links
Other
RRM
family RBPs
Other
Echinops telfairi
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R005284
Ailuropoda melanoleuca
Ame_R005284
N
0.000
ENSPPYG00000011019
Pongo pygmaeus
ENSPPYG00000011019
I
0.000
SFRS6
Taeniopygia guttata
ENSTGUG00000003455
I
0.000
Sfrs6
Rattus norvegicus
ENSRNOG00000006380
I
0.000
SFRS6_BOVIN
Bos taurus
ENSBTAG00000008527
I
0.000
SRSF4
Echinops telfairi
ENSETEG00000009774
N
0.000
SRSF6
Vicugna pacos
ENSVPAG00000003016
N
0.000
SRSF6
Macaca mulatta
ENSMMUG00000006742
N
0.000
SRSF6
Monodelphis domestica
ENSMODG00000003107
I
0.000
Srsf6
Mus musculus
ENSMUSG00000016921
I
0.000
SRSF6
Oryzias latipes
ENSORLG00000003530
I
0.000
SRSF6
Procavia capensis
ENSPCAG00000010954
I
0.000
SRSF6
Pteropus vampyrus
ENSPVAG00000015232
I
0.000
SRSF6
Sus scrofa
ENSSSCG00000007362
N
0.000
SRSF6
Microcebus murinus
ENSMICG00000008537
I
0.000
SRSF6
Macropus eugenii
ENSMEUG00000014615
I
0.000
SRSF6
Choloepus hoffmanni
ENSCHOG00000000561
N
0.000
SRSF6
Callithrix jacchus
ENSCJAG00000017888
I
0.000
SRSF6
Cavia porcellus
ENSCPOG00000011761
I
0.000
SRSF6
Dasypus novemcinctus
ENSDNOG00000008410
I
0.000
Srsf6
Dipodomys ordii
ENSDORG00000001945
I
0.000
SRSF6
Echinops telfairi
ENSETEG00000006221
I
0.000
SRSF6
Felis catus
ENSFCAG00000013915
N
0.000
SRSF6
Homo sapiens
ENSG00000124193
I
0.000
SRSF6
Gallus gallus
ENSGALG00000000990
N
0.000
SRSF6
Gorilla gorilla
ENSGGOG00000009808
I
0.000
SRSF6
Anolis carolinensis
ENSACAG00000002061
I
0.000
srsf6a
Danio rerio
ENSDARG00000013729
I
0.000
SRSF6_RABIT
Oryctolagus cuniculus
ENSOCUG00000009785
N
0.000