CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TNRC6C
(
Felis catus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSFCAG00000013005
T37131_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000012064
RRM
1516
1580
LVLRNLTPQIDGSTLRTLCLQHGPLVTFHLNLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTTIL
Links
Other
RRM
family RBPs
Other
Felis catus
RBPs
115 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
cassava45172.m1
Manihot esculenta
cassava45172.m1
N
0.000
ppa016115m
Prunus persica
ppa016115m
N
0.000
ppa016726m
Prunus persica
ppa016726m
N
0.000
ppa021588m
Prunus persica
ppa021588m
N
0.000
ppa022673m
Prunus persica
ppa022673m
N
0.000
ppa024392m
Prunus persica
ppa024392m
N
0.000
ppa026182m
Prunus persica
ppa026182m
N
0.000