TNRC6A (Oryzias latipes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSORLG00000012798 T40204_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000016025 RRM 1562 1626

Links

Other RRM family RBPs
Other Oryzias latipes RBPs

115 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
TNRC6A Gasterosteus aculeatus ENSGACG00000014332 N 0.969
TNRC6A Takifugu rubripes ENSTRUG00000009839 N 0.954
TNRC6A Danio rerio ENSDARG00000079688 N 0.954
Ame_R017991 Ailuropoda melanoleuca Ame_R017991 N 0.908
TNRC6A Gorilla gorilla ENSGGOG00000005137 N 0.908
TNRC6A Gallus gallus ENSGALG00000006068 N 0.908
TNRC6A Loxodonta africana ENSLAFG00000004209 N 0.908
TNRC6A Macropus eugenii ENSMEUG00000015959 N 0.908
TNRC6A Tarsius syrichta ENSTSYG00000012711 N 0.908
TNRC6A Tursiops truncatus ENSTTRG00000002008 N 0.908
TNRC6A Bos taurus ENSBTAG00000017999 N 0.908
ENSPPYG00000007202 Pongo pygmaeus ENSPPYG00000007202 N 0.908
TNRC6A Equus caballus ENSECAG00000025056 N 0.908
TNRC6A Callithrix jacchus ENSCJAG00000020677 N 0.908
Tnrc6a Dipodomys ordii ENSDORG00000014734 N 0.908
TNRC6A Choloepus hoffmanni ENSCHOG00000009374 N 0.908
TNRC6A Canis familiaris ENSCAFG00000017531 N 0.908
TNRC6C Gasterosteus aculeatus ENSGACG00000012320 N 0.908
TNRC6A Homo sapiens ENSG00000090905 N 0.908
TNRC6A Microcebus murinus ENSMICG00000001883 N 0.908
TNRC6A Meleagris gallopavo ENSMGAG00000006455 N 0.908
TNRC6A Monodelphis domestica ENSMODG00000016348 N 0.908
TNRC6A Taeniopygia guttata ENSTGUG00000006142 N 0.908
TNRC6C Oryzias latipes ENSORLG00000003327 N 0.908
TNRC6A Macaca mulatta ENSMMUG00000020428 N 0.908
TNRC6C Tetraodon nigroviridis ENSTNIG00000004178 N 0.908
TNRC6A Tupaia belangeri ENSTBEG00000014965 N 0.908
Tnrc6a Rattus norvegicus ENSRNOG00000024737 N 0.908
TNRC6A Ornithorhynchus anatinus ENSOANG00000007672 N 0.908
Tnrc6a Mus musculus ENSMUSG00000052707 N 0.908
TNRC6A Oryctolagus cuniculus ENSOCUG00000004325 N 0.908
TNRC6A Ochotona princeps ENSOPRG00000005819 N 0.892
TNRC6A Anolis carolinensis ENSACAG00000011857 N 0.892
TNRC6C Takifugu rubripes ENSTRUG00000011685 N 0.892
TNRC6C Oryzias latipes ENSORLG00000009837 N 0.892
TNRC6C Danio rerio ENSDARG00000078036 N 0.892
TNRC6C Danio rerio ENSDARG00000076847 N 0.892
TNRC6C Takifugu rubripes ENSTRUG00000012583 N 0.892
TNRC6C Tetraodon nigroviridis ENSTNIG00000005273 N 0.892
TNRC6C Danio rerio ENSDARG00000076356 N 0.892
tnrc6c Xenopus tropicalis ENSXETG00000019470 N 0.892
TNRC6C Procavia capensis ENSPCAG00000012510 N 0.877
LOC100058134 Equus caballus ENSECAG00000012486 N 0.877
Tnrc6c Mus musculus ENSMUSG00000025571 N 0.877
TNRC6C Meleagris gallopavo ENSMGAG00000003906 N 0.877
TNRC6C Macaca mulatta ENSMMUG00000011924 N 0.877
TNRC6C Microcebus murinus ENSMICG00000003952 N 0.877
TNRC6C Macropus eugenii ENSMEUG00000005104 N 0.877
TNRC6C Monodelphis domestica ENSMODG00000001785 N 0.877
TNRC6C Ornithorhynchus anatinus ENSOANG00000009758 N 0.877
TNRC6C Gallus gallus ENSGALG00000001725 N 0.877
TNRC6C Gorilla gorilla ENSGGOG00000011304 N 0.877
TNRC6C Homo sapiens ENSG00000078687 N 0.877
TNRC6C Dasypus novemcinctus ENSDNOG00000003247 N 0.877
TNRC6C Anolis carolinensis ENSACAG00000016198 N 0.877
TNRC6C Callithrix jacchus ENSCJAG00000019431 N 0.877
ENSPPYG00000008679 Pongo pygmaeus ENSPPYG00000008679 N 0.877
TNRC6C Tursiops truncatus ENSTTRG00000010828 N 0.877
TNRC6C Pan troglodytes ENSPTRG00000009699 N 0.877
TNRC6C Cavia porcellus ENSCPOG00000000467 N 0.877
TNRC6C Taeniopygia guttata ENSTGUG00000007733 N 0.877
TNRC6C Felis catus ENSFCAG00000013005 N 0.862
TNRC6C Canis familiaris ENSCAFG00000005224 N 0.862
TNRC6C Echinops telfairi ENSETEG00000005527 N 0.862
TNRC6C Bos taurus ENSBTAG00000018658 N 0.862
Ame_R006400 Ailuropoda melanoleuca Ame_R006400 N 0.862
TNRC6C Loxodonta africana ENSLAFG00000011122 N 0.862
estExt_fgenesh2_pg.C_5340004 Branchiostoma floridae estExt_fgenesh2_pg.C_5340004 N 0.831
estExt_fgenesh2_pg.C_4930048 Branchiostoma floridae estExt_fgenesh2_pg.C_4930048 N 0.831
TNRC6A Myotis lucifugus ENSMLUG00000002701 N 0.800
TNRC6C Otolemur garnettii ENSOGAG00000007197 N 0.785
TNRC6B Tarsius syrichta ENSTSYG00000011836 N 0.769
TNRC6B Sus scrofa ENSSSCG00000000078 N 0.769
TNRC6B Sorex araneus ENSSARG00000007971 N 0.769
Tnrc6b Rattus norvegicus ENSRNOG00000024907 N 0.769
TNRC6B Choloepus hoffmanni ENSCHOG00000010004 N 0.769
TNRC6B Tursiops truncatus ENSTTRG00000011465 N 0.769
TNRC6B Microcebus murinus ENSMICG00000014056 N 0.769
TNRC6B Erinaceus europaeus ENSEEUG00000008690 N 0.769
Tnrc6b Mus musculus ENSMUSG00000047888 N 0.769
TNRC6B Monodelphis domestica ENSMODG00000008960 N 0.769
TNRC6B Macaca mulatta ENSMMUG00000021345 N 0.769
TNRC6B Spermophilus tridecemlineatus ENSSTOG00000008927 N 0.769
TNRC6B Myotis lucifugus ENSMLUG00000008765 N 0.769
ENSPPYG00000011849 Pongo pygmaeus ENSPPYG00000011849 N 0.769
TNRC6B Canis familiaris ENSCAFG00000001255 N 0.769
TNRC6B Loxodonta africana ENSLAFG00000014473 N 0.769
TNRC6C Gasterosteus aculeatus ENSGACG00000019401 N 0.769
ENSCJAG00000031596 Callithrix jacchus ENSCJAG00000031596 N 0.769
TNRC6B Equus caballus ENSECAG00000009759 N 0.769
TNRC6B Bos taurus ENSBTAG00000021076 N 0.769
XR_024166.1 Pan troglodytes ENSPTRG00000014406 N 0.769
TNRC6B Anolis carolinensis ENSACAG00000007281 N 0.769
TNRC6B Ochotona princeps ENSOPRG00000012054 N 0.769
TNRC6B Cavia porcellus ENSCPOG00000005705 N 0.769
TNRC6B Oryctolagus cuniculus ENSOCUG00000016128 N 0.769
TNRC6B Homo sapiens ENSG00000100354 N 0.769
Tnrc6b Dipodomys ordii ENSDORG00000003386 N 0.769
TNRC6B Gorilla gorilla ENSGGOG00000008444 N 0.769
TNRC6B Pteropus vampyrus ENSPVAG00000004975 N 0.769
TNRC6B Danio rerio ENSDARG00000074161 N 0.754
TNRC6B Meleagris gallopavo ENSMGAG00000012333 N 0.754
Ame_R002380 Ailuropoda melanoleuca Ame_R002380 N 0.754
TNRC6B Gasterosteus aculeatus ENSGACG00000004573 N 0.754
TNRC6B Gallus gallus ENSGALG00000012050 N 0.754
TNRC6B Gasterosteus aculeatus ENSGACG00000007421 N 0.754
TNRC6B Dasypus novemcinctus ENSDNOG00000012744 N 0.754
TNRC6B Taeniopygia guttata ENSTGUG00000010128 N 0.754
ENSTGUG00000010138 Taeniopygia guttata ENSTGUG00000010138 N 0.754
TNRC6B Takifugu rubripes ENSTRUG00000016987 N 0.754
TNRC6A Echinops telfairi ENSETEG00000014658 N 0.754
TNRC6B Oryzias latipes ENSORLG00000002794 N 0.738
TNRC6B Tupaia belangeri ENSTBEG00000017272 N 0.738
TNRC6B Danio rerio ENSDARG00000076389 N 0.708
amel4_ncbi_hmm5263 Apis mellifera amel4_ncbi_hmm5263 N 0.708