CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
PSPC1
(
Meleagris gallopavo
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMGAG00000015134
T38447_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000016047
RRM
40
105
LTVKNLSPVVSNELLEQAFSQFGPVERAVVVVDDRGRATGKGFVEFAAKPPARKALERCSDGAFLL
Links
Other
RRM
family RBPs
Other
Meleagris gallopavo
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH45128
Xenopus laevis
AAH45128
I
0.000
BAE54372
Xenopus laevis
BAE54372
I
0.000
ENSTNIG00000011331
Tetraodon nigroviridis
ENSTNIG00000011331
I
0.000
ENSTRUG00000003783
Takifugu rubripes
ENSTRUG00000003783
I
0.000
nono
Danio rerio
ENSDARG00000020482
I
0.000
NONO
Gasterosteus aculeatus
ENSGACG00000011824
I
0.000
NONO
Takifugu rubripes
ENSTRUG00000005554
I
0.000
nono
Xenopus tropicalis
ENSXETG00000020868
I
0.000