nono (Danio rerio)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDARG00000020482 T36099_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
NONO
M309_0.6 		Homo sapiens Sequence logo not available GAGAGGAAC SELEX
Cook et al.(2011)
490_12403470 		0.727
NONO
M307_0.6 		Homo sapiens AGGGA SELEX
Cook et al.(2011)
488_9001221 		0.727
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000014106 RRM 74 138
ENSDARP00000014106 RRM 148 211

Links

Other RRM family RBPs
Other Danio rerio RBPs

71 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
NONO Gasterosteus aculeatus ENSGACG00000011824 I 0.798
NONO Takifugu rubripes ENSTRUG00000005554 I 0.785
AAH45128 Xenopus laevis AAH45128 I 0.777
BAE54372 Xenopus laevis BAE54372 I 0.777
nono Xenopus tropicalis ENSXETG00000020868 I 0.775
NONO Oryzias latipes ENSORLG00000012801 N 0.769
pspc1 Danio rerio ENSDARG00000006621 N 0.760
Q5ZIZ5_CHICK Gallus gallus ENSGALG00000005507 I 0.740
NONO Meleagris gallopavo ENSMGAG00000008869 I 0.740
NONO Taeniopygia guttata ENSTGUG00000007048 I 0.740
NONO Monodelphis domestica ENSMODG00000004445 I 0.735
NONO Macropus eugenii ENSMEUG00000004294 I 0.729
NONO Equus caballus ENSECAG00000008502 I 0.727
NONO Pteropus vampyrus ENSPVAG00000016503 I 0.727
XR_025068.1 Pan troglodytes ENSPTRG00000022010 I 0.727
NONO Procavia capensis ENSPCAG00000002541 I 0.727
NONO Otolemur garnettii ENSOGAG00000004834 I 0.727
Q2KJ42_BOVIN Bos taurus ENSBTAG00000012152 I 0.727
Nono Rattus norvegicus ENSRNOG00000003689 I 0.727
TAF1 Callithrix jacchus ENSCJAG00000013390 I 0.727
ENSCAFG00000017071 Canis familiaris ENSCAFG00000017071 I 0.727
NONO Tursiops truncatus ENSTTRG00000009605 I 0.727
NONO Erinaceus europaeus ENSEEUG00000014404 I 0.727
ENSOCUG00000021848 Oryctolagus cuniculus ENSOCUG00000021848 I 0.727
Ame_R017809 Ailuropoda melanoleuca Ame_R017809 I 0.727
LOC607081 Canis familiaris ENSCAFG00000003207 I 0.727
NONO Vicugna pacos ENSVPAG00000002272 I 0.727
ENSPPYG00000020451 Pongo pygmaeus ENSPPYG00000020451 I 0.727
NONO Loxodonta africana ENSLAFG00000013422 I 0.727
NONO Gorilla gorilla ENSGGOG00000006194 I 0.727
ENSCPOG00000010263 Cavia porcellus ENSCPOG00000010263 I 0.727
NONO Homo sapiens ENSG00000147140 D 0.727
LOC697263 Macaca mulatta ENSMMUG00000020481 I 0.727
NONO Microcebus murinus ENSMICG00000000232 I 0.727
Nono Mus musculus ENSMUSG00000031311 I 0.727
NONO Anolis carolinensis ENSACAG00000015026 I 0.725
PSPC1 Homo sapiens ENSG00000121390 I 0.723
PSPC1 Macropus eugenii ENSMEUG00000000476 I 0.723
PSPC1 Monodelphis domestica ENSMODG00000008029 I 0.723
PSPC1 Loxodonta africana ENSLAFG00000010968 I 0.723
ENSPPYG00000005186 Pongo pygmaeus ENSPPYG00000005186 I 0.723
Ame_R014248 Ailuropoda melanoleuca Ame_R014248 I 0.723
Pspc1 Mus musculus ENSMUSG00000021938 I 0.723
PSPC1 Pan troglodytes ENSPTRG00000005677 I 0.723
PSPC1 Choloepus hoffmanni ENSCHOG00000008913 I 0.723
Pspc1 Rattus norvegicus ENSRNOG00000020782 I 0.723
PSPC1 Macaca mulatta ENSMMUG00000020262 I 0.723
PSPC1 Cavia porcellus ENSCPOG00000000395 I 0.723
PSPC1 Sorex araneus ENSSARG00000000888 I 0.723
PSPC1 Callithrix jacchus ENSCJAG00000004554 I 0.723
PSPC1 Myotis lucifugus ENSMLUG00000017663 I 0.723
PSPC1 Oryctolagus cuniculus ENSOCUG00000006153 I 0.723
PSPC1 Erinaceus europaeus ENSEEUG00000011288 I 0.721
NONO Sorex araneus ENSSARG00000007959 I 0.720
ENSCPOG00000023605 Cavia porcellus ENSCPOG00000023605 I 0.720
PSPC1 Anolis carolinensis ENSACAG00000002093 I 0.718
ENSTRUG00000003783 Takifugu rubripes ENSTRUG00000003783 I 0.718
PSPC1 Taeniopygia guttata ENSTGUG00000011295 I 0.718
PSPC1_CHICK Gallus gallus ENSGALG00000017142 I 0.718
PSPC1 Pteropus vampyrus ENSPVAG00000005036 I 0.715
PSPC1 Sus scrofa ENSSSCG00000009569 I 0.715
PSPC1 Tursiops truncatus ENSTTRG00000003343 I 0.715
Pspc1 Dipodomys ordii ENSDORG00000016050 I 0.715
PSPC1_BOVIN Bos taurus ENSBTAG00000003934 I 0.715
NONO Spermophilus tridecemlineatus ENSSTOG00000015869 I 0.714
PSPC1 Gorilla gorilla ENSGGOG00000003414 I 0.712
ENSCJAG00000003136 Callithrix jacchus ENSCJAG00000003136 I 0.712
ENSTNIG00000011331 Tetraodon nigroviridis ENSTNIG00000011331 I 0.710
PSPC1 Felis catus ENSFCAG00000013701 I 0.705
sfpq Xenopus tropicalis ENSXETG00000009682 I 0.702
PSPC1 Dasypus novemcinctus ENSDNOG00000011078 N 0.700