CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ox_plat1_152522.152522
(
Ornithorhynchus anatinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOANG00000019928
T39574_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000025288
RRM
38
106
IFVGIDFKTNESDLRKFFAQYGAVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQEAEKLNYKDKKLN
Links
Other
RRM
family RBPs
Other
Ornithorhynchus anatinus
RBPs
31 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R008142
Ailuropoda melanoleuca
Ame_R008142
N
0.886
BOLL
Myotis lucifugus
ENSMLUG00000004999
N
0.900
BOLL
Macaca mulatta
ENSMMUG00000023811
N
0.914
BOLL
Monodelphis domestica
ENSMODG00000012323
N
0.730
Boll
Mus musculus
ENSMUSG00000025977
N
0.886
BOLL
Oryctolagus cuniculus
ENSOCUG00000013979
N
0.886
BOLL
Otolemur garnettii
ENSOGAG00000007207
N
0.900
BOLL
Ochotona princeps
ENSOPRG00000013693
N
0.886
BOLL
Pan troglodytes
ENSPTRG00000012777
N
0.914
Boll
Rattus norvegicus
ENSRNOG00000015798
N
0.886
BOLL
Sus scrofa
ENSSSCG00000016082
N
0.771
BOLL
Spermophilus tridecemlineatus
ENSSTOG00000003536
N
0.729
BOLL
Tupaia belangeri
ENSTBEG00000017343
N
0.729
BOLL
Taeniopygia guttata
ENSTGUG00000010496
N
0.771
BOLL
Microcebus murinus
ENSMICG00000011845
N
0.886
BOLL
Anolis carolinensis
ENSACAG00000009285
N
0.886
BOLL
Canis familiaris
ENSCAFG00000010947
N
0.900
BOLL
Cavia porcellus
ENSCPOG00000000390
N
0.900
Boll
Dipodomys ordii
ENSDORG00000010791
N
0.729
BOLL
Erinaceus europaeus
ENSEEUG00000003441
N
0.886
BOLL
Echinops telfairi
ENSETEG00000013582
N
0.886
BOLL
Homo sapiens
ENSG00000152430
N
0.914
BOLL
Gallus gallus
ENSGALG00000008116
N
0.857
BOLL
Gorilla gorilla
ENSGGOG00000013594
N
0.914
BOLL
Loxodonta africana
ENSLAFG00000010956
N
0.886
BOLL
Macropus eugenii
ENSMEUG00000011305
N
0.900
BOLL
Choloepus hoffmanni
ENSCHOG00000012634
N
0.841
C1JGV6_BOVIN
Bos taurus
ENSBTAG00000031614
N
0.900
ENSMGAG00000007162
Meleagris gallopavo
ENSMGAG00000007162
N
0.857
ENSPPYG00000013050
Pongo pygmaeus
ENSPPYG00000013050
N
0.914
Q6EVI8_CALJA
Callithrix jacchus
ENSCJAG00000004092
N
0.900