SRSF6_RABIT (Oryctolagus cuniculus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOCUG00000009785 T39670_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000008429 RRM 4 42
ENSOCUP00000008429 RRM 118 183

Links

Other RRM family RBPs
Other Oryctolagus cuniculus RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A7MB38_BOVIN Bos taurus ENSBTAG00000013309 I 0.000
AAEL012621 Aedes aegypti AAEL012621 I 0.000
AAH44265 Xenopus laevis AAH44265 I 0.000
AAH46668 Xenopus laevis AAH46668 I 0.000
AAH71160 Xenopus laevis AAH71160 I 0.000
AGAP004592 Anopheles gambiae AGAP004592 I 0.000
amel4_ncbi_hmm6583 Apis mellifera amel4_ncbi_hmm6583 I 0.000
Ame_R018370 Ailuropoda melanoleuca Ame_R018370 I 0.000
B52 Drosophila melanogaster FBgn0004587 D 0.000
BGIBMGA010178 Bombyx mori BGIBMGA010178 I 0.000
CPIJ008634 Culex quinquefasciatus CPIJ008634 I 0.000
CpipJ_CPIJ008634 Culex pipiens CpipJ_CPIJ008634 I 0.000
DGIL_AUG5s17730g6t1 Acyrtosiphon pisum DGIL_AUG5s17730g6t1 I 0.000
ENSACAG00000005544 Anolis carolinensis ENSACAG00000005544 I 0.000
ENSGACG00000011761 Gasterosteus aculeatus ENSGACG00000011761 I 0.000
ENSMGAG00000011888 Meleagris gallopavo ENSMGAG00000011888 I 0.000
ENSPPYG00000001629 Pongo pygmaeus ENSPPYG00000001629 I 0.000
ENSPPYG00000011019 Pongo pygmaeus ENSPPYG00000011019 I 0.775
estExt_fgenesh1_pg.C_3000025 Capitella teleta estExt_fgenesh1_pg.C_3000025 I 0.000
estExt_fgenesh2_pg.C_920027 Branchiostoma floridae estExt_fgenesh2_pg.C_920027 I 0.000
estExt_fgenesh2_pm.C_690014 Branchiostoma floridae estExt_fgenesh2_pm.C_690014 I 0.000
estExt_Genewise1Plus.C_150169 Daphnia pulex estExt_Genewise1Plus.C_150169 I 0.000
estExt_Genewise1Plus.C_1640045 Capitella teleta estExt_Genewise1Plus.C_1640045 I 0.000
GA10599-RA Drosophila pseudoobscura FBgn0070656 I 0.000
GF17608 Drosophila ananassae FBgn0094626 I 0.000
GH18528 Drosophila grimshawi FBgn0125995 I 0.000
GI22065 Drosophila mojavensis FBgn0144794 I 0.000
GJ24113 Drosophila virilis FBgn0211197 I 0.000
GK13948 Drosophila willistoni FBgn0215954 I 0.000
GL23543 Drosophila persimilis FBgn0161133 I 0.000
ISCW002531 Ixodes scapularis ISCW002531 I 0.000
ISCW010321 Ixodes scapularis ISCW010321 I 0.000
ISCW010322 Ixodes scapularis ISCW010322 I 0.000
ISCW014220 Ixodes scapularis ISCW014220 I 0.000
LOC100402973 Callithrix jacchus ENSCJAG00000009971 I 0.000
nasonia_NCBI_hmm368623 Nasonia vitripennis nasonia_NCBI_hmm368623 I 0.000
PACS2 Takifugu rubripes ENSTRUG00000010740 I 0.000
PHUM290500 Pediculus humanus PHUM290500 I 0.000
Q5ZKT4_CHICK Gallus gallus ENSGALG00000009484 I 0.000
Sfrs4 Rattus norvegicus ENSRNOG00000010007 I 0.000
SFRS5 Taeniopygia guttata ENSTGUG00000011425 I 0.000
SFRS6 Taeniopygia guttata ENSTGUG00000003455 I 0.760
SFRS6_BOVIN Bos taurus ENSBTAG00000008527 I 0.767
SRSF4 Cavia porcellus ENSCPOG00000007263 I 0.000
SRSF4 Tursiops truncatus ENSTTRG00000002572 I 0.000
SRSF4 Gasterosteus aculeatus ENSGACG00000002389 I 0.000
SRSF4 Macaca mulatta ENSMMUG00000007110 I 0.000
SRSF4 Tetraodon nigroviridis ENSTNIG00000000115 I 0.000
SRSF4 Meleagris gallopavo ENSMGAG00000002400 I 0.000
SRSF4 Loxodonta africana ENSLAFG00000002575 I 0.000
SRSF4 Homo sapiens ENSG00000116350 I 0.000
SRSF4 Erinaceus europaeus ENSEEUG00000008479 I 0.000
Srsf4 Dipodomys ordii ENSDORG00000002459 I 0.000
SRSF4 Procavia capensis ENSPCAG00000009879 I 0.000
SRSF4 Dasypus novemcinctus ENSDNOG00000000968 I 0.000
SRSF4 Tarsius syrichta ENSTSYG00000007903 I 0.000
SRSF4 Takifugu rubripes ENSTRUG00000011891 I 0.000
SRSF4 Monodelphis domestica ENSMODG00000011052 I 0.000
SRSF4 Oryzias latipes ENSORLG00000009430 I 0.000
SRSF4 Ochotona princeps ENSOPRG00000010098 I 0.000
SRSF4 Pan troglodytes ENSPTRG00000000445 I 0.000
SRSF4 Oryctolagus cuniculus ENSOCUG00000001837 I 0.000
SRSF4 Sus scrofa ENSSSCG00000003588 I 0.000
Srsf4 Mus musculus ENSMUSG00000028911 I 0.000
SRSF4 Tetraodon nigroviridis ENSTNIG00000005573 I 0.000
SRSF5 Monodelphis domestica ENSMODG00000011362 I 0.000
SRSF5 Anolis carolinensis ENSACAG00000005143 I 0.000
SRSF5 Oryzias latipes ENSORLG00000009268 I 0.000
srsf5 Xenopus tropicalis ENSXETG00000002211 I 0.000
SRSF5 Echinops telfairi ENSETEG00000020396 I 0.000
SRSF5 Loxodonta africana ENSLAFG00000005260 I 0.000
srsf5a Danio rerio ENSDARG00000029818 I 0.000
SRSF6 Anolis carolinensis ENSACAG00000002061 I 0.752
SRSF6 Callithrix jacchus ENSCJAG00000017888 I 0.775
SRSF6 Macropus eugenii ENSMEUG00000014615 I 0.767
SRSF6 Procavia capensis ENSPCAG00000010954 I 0.767
SRSF6 Dasypus novemcinctus ENSDNOG00000008410 I 0.775
Srsf6 Dipodomys ordii ENSDORG00000001945 I 0.775
SRSF6 Monodelphis domestica ENSMODG00000003107 I 0.767
SRSF6 Microcebus murinus ENSMICG00000008537 I 0.767
SRSF6 Gorilla gorilla ENSGGOG00000009808 I 0.775
srsf6 Xenopus tropicalis ENSXETG00000025503 I 0.713
SRSF6 Homo sapiens ENSG00000124193 I 0.775
XB-GENE-5954653 Xenopus tropicalis ENSXETG00000017937 I 0.000
XP_001180940.1 Strongylocentrotus purpuratus XP_001180940.1 I 0.000
XP_002200515.1 Taeniopygia guttata ENSTGUG00000011492 I 0.000
XP_798746.1 Strongylocentrotus purpuratus XP_798746.1 I 0.000