TARDBP (Otolemur garnettii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOGAG00000016721 T39917_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TARDBP
M074_0.6 		Homo sapiens GAAUGD RNAcompete
Ray et al.(2013)
RNCMPT00076 		0.702
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000014965 RRM 131 174
ENSOGAP00000014965 RRM 193 244

Links

Other RRM family RBPs
Other Otolemur garnettii RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R011012 Ailuropoda melanoleuca Ame_R011012 I 0.738
ENSACAG00000011709 Anolis carolinensis ENSACAG00000011709 I 0.713
ENSCAFG00000016759 Canis familiaris ENSCAFG00000016759 I 0.738
ENSOCUG00000004049 Oryctolagus cuniculus ENSOCUG00000004049 I 0.730
LOC100014246 Monodelphis domestica ENSMODG00000011233 I 0.738
LOC100051482 Equus caballus ENSECAG00000008338 I 0.738
LOC100405373 Callithrix jacchus ENSCJAG00000002381 I 0.887
Q2KJ45_BOVIN Bos taurus ENSBTAG00000003697 I 0.738
TADBP_CHICK Gallus gallus ENSGALG00000002906 I 0.713
TARDBP Ornithorhynchus anatinus ENSOANG00000013320 I 0.738
TARDBP Ochotona princeps ENSOPRG00000006352 I 0.738
TARDBP Procavia capensis ENSPCAG00000010442 I 0.713
TARDBP Tursiops truncatus ENSTTRG00000001312 I 0.738
TARDBP Pteropus vampyrus ENSPVAG00000014773 N 0.979
TARDBP Vicugna pacos ENSVPAG00000009543 I 0.738
TARDBP Tupaia belangeri ENSTBEG00000000263 I 0.738
TARDBP Taeniopygia guttata ENSTGUG00000003255 I 0.721
TARDBP Tarsius syrichta ENSTSYG00000004077 I 0.730
Tardbp Rattus norvegicus ENSRNOG00000012455 I 0.705
Tardbp Mus musculus ENSMUSG00000041459 I 0.705
TARDBP Myotis lucifugus ENSMLUG00000004263 I 0.756
TARDBP Cavia porcellus ENSCPOG00000011619 I 0.713
TARDBP Dasypus novemcinctus ENSDNOG00000008531 I 0.730
Tardbp Dipodomys ordii ENSDORG00000007465 I 0.713
TARDBP Erinaceus europaeus ENSEEUG00000003755 I 0.738
TARDBP Echinops telfairi ENSETEG00000004358 I 0.721
TARDBP Felis catus ENSFCAG00000000050 I 0.721
TARDBP Homo sapiens ENSG00000120948 D 0.866
TARDBP Loxodonta africana ENSLAFG00000014421 I 0.738
TARDBP Macropus eugenii ENSMEUG00000006548 I 0.738
TARDBP Meleagris gallopavo ENSMGAG00000004637 I 0.713
TARDBP Microcebus murinus ENSMICG00000003838 I 0.990