TARDBP (Tarsius syrichta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTSYG00000004077 T42429_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TARDBP
M074_0.6 		Homo sapiens GAAUGD RNAcompete
Ray et al.(2013)
RNCMPT00076 		0.926
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTSYP00000003725 RRM 106 174
ENSTSYP00000003725 RRM 193 244

Links

Other RRM family RBPs
Other Tarsius syrichta RBPs

54 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSOCUG00000004049 Oryctolagus cuniculus ENSOCUG00000004049 I 0.992
TARDBP Dasypus novemcinctus ENSDNOG00000008531 I 0.992
Q2KJ45_BOVIN Bos taurus ENSBTAG00000003697 I 0.992
TARDBP Ochotona princeps ENSOPRG00000006352 I 0.992
ENSCAFG00000016759 Canis familiaris ENSCAFG00000016759 I 0.983
TARDBP Felis catus ENSFCAG00000000050 I 0.983
TARDBP Erinaceus europaeus ENSEEUG00000003755 I 0.983
TARDBP Echinops telfairi ENSETEG00000004358 I 0.983
TARDBP Tursiops truncatus ENSTTRG00000001312 I 0.983
TARDBP Loxodonta africana ENSLAFG00000014421 I 0.983
TARDBP Ornithorhynchus anatinus ENSOANG00000013320 I 0.983
TARDBP Vicugna pacos ENSVPAG00000009543 I 0.983
TARDBP Tupaia belangeri ENSTBEG00000000263 I 0.983
Ame_R011012 Ailuropoda melanoleuca Ame_R011012 I 0.983
LOC100014246 Monodelphis domestica ENSMODG00000011233 I 0.983
TARDBP Macropus eugenii ENSMEUG00000006548 I 0.983
LOC100051482 Equus caballus ENSECAG00000008338 I 0.983
TADBP_CHICK Gallus gallus ENSGALG00000002906 I 0.975
TARDBP Meleagris gallopavo ENSMGAG00000004637 I 0.975
Tardbp Mus musculus ENSMUSG00000041459 I 0.975
TARDBP Procavia capensis ENSPCAG00000010442 I 0.975
Tardbp Rattus norvegicus ENSRNOG00000012455 I 0.975
TARDBP Taeniopygia guttata ENSTGUG00000003255 I 0.967
Tardbp Dipodomys ordii ENSDORG00000007465 I 0.967
ENSACAG00000011709 Anolis carolinensis ENSACAG00000011709 I 0.959
TARDBP Cavia porcellus ENSCPOG00000011619 I 0.959
TARDBP Myotis lucifugus ENSMLUG00000004263 I 0.950
LOC100405373 Callithrix jacchus ENSCJAG00000002381 I 0.950
AAM33247 Xenopus laevis AAM33247 I 0.934
tardbp Xenopus tropicalis ENSXETG00000006317 I 0.934
ENSMMUG00000007456 Macaca mulatta ENSMMUG00000007456 I 0.926
ENSPPYG00000001894 Pongo pygmaeus ENSPPYG00000001894 I 0.926
XR_021519.1 Pan troglodytes ENSPTRG00000000136 I 0.926
TARDBP Homo sapiens ENSG00000120948 D 0.926
tardbpl Danio rerio ENSDARG00000004452 I 0.909
TARDBP Oryzias latipes ENSORLG00000003593 I 0.901
TARDBP Gasterosteus aculeatus ENSGACG00000012164 I 0.893
AAH44271 Xenopus laevis AAH44271 I 0.893
TARDBP Tetraodon nigroviridis ENSTNIG00000014758 I 0.868
TARDBP Takifugu rubripes ENSTRUG00000012063 I 0.868
TARDBP Oryzias latipes ENSORLG00000005188 I 0.868
TARDBP Tetraodon nigroviridis ENSTNIG00000015173 I 0.861
TARDBP Gasterosteus aculeatus ENSGACG00000007124 I 0.861
TARDBP Takifugu rubripes ENSTRUG00000012070 I 0.852
tardbp Danio rerio ENSDARG00000040031 I 0.777
amel4_ncbi_hmm11035 Apis mellifera amel4_ncbi_hmm11035 I 0.754
e_gw1.17.468.1 Lottia gigantea e_gw1.17.468.1 I 0.748
ENSMMUG00000003940 Macaca mulatta ENSMMUG00000003940 I 0.746
nasonia_NCBI_hmm274594 Nasonia vitripennis nasonia_NCBI_hmm274594 I 0.746
TARDBP Pteropus vampyrus ENSPVAG00000014773 N 0.746
TARDBP Microcebus murinus ENSMICG00000003838 I 0.738
TARDBP Otolemur garnettii ENSOGAG00000016721 I 0.730
estExt_Genewise1Plus.C_8190002 Capitella teleta estExt_Genewise1Plus.C_8190002 I 0.726
e_gw.96.287.1 Branchiostoma floridae e_gw.96.287.1 I 0.720