ENSPPYG00000013265 (Pongo pygmaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPPYG00000013265 T40539_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
NCL
M245_0.6 		Homo sapiens CCGAAAKCCCGAAGYAGG SELEX
Cook et al.(2011)
1004_8676391 		0.867
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000014829 RRM 336 380
ENSPPYP00000014829 RRM 398 463
ENSPPYP00000014829 RRM 491 557
ENSPPYP00000014829 RRM 577 644
ENSPPYP00000014830 RRM 265 306
ENSPPYP00000014830 RRM 324 389
ENSPPYP00000014830 RRM 417 483
ENSPPYP00000014830 RRM 503 570

Links

Other RRM family RBPs
Other Pongo pygmaeus RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC100393797 Callithrix jacchus ENSCJAG00000031625 N 0.000
RBM40_BOVIN Bos taurus ENSBTAG00000019091 N 0.000
RNPC3 Anolis carolinensis ENSACAG00000002029 N 0.000
RNPC3 Oryctolagus cuniculus ENSOCUG00000004016 N 0.000
RNPC3 Ornithorhynchus anatinus ENSOANG00000008220 N 0.000
Rnpc3 Mus musculus ENSMUSG00000027981 N 0.000
RNPC3 Monodelphis domestica ENSMODG00000002946 N 0.000
RNPC3 Macaca mulatta ENSMMUG00000018039 N 0.000
RNPC3 Loxodonta africana ENSLAFG00000032342 N 0.000
RNPC3 Gallus gallus ENSGALG00000005162 N 0.000
RNPC3 Gasterosteus aculeatus ENSGACG00000002048 N 0.000
RNPC3 Homo sapiens ENSG00000185946 N 0.000
rnpc3 Danio rerio ENSDARG00000011247 N 0.000
RNPC3 Canis familiaris ENSCAFG00000019972 N 0.000
Rnpc3 Rattus norvegicus ENSRNOG00000017310 N 0.000