ENSPPYG00000013265 (Pongo pygmaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPPYG00000013265 T40539_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
NCL
M245_0.6 		Homo sapiens CCGAAAKCCCGAAGYAGG SELEX
Cook et al.(2011)
1004_8676391 		0.867
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000014829 RRM 336 380
ENSPPYP00000014829 RRM 398 463
ENSPPYP00000014829 RRM 491 557
ENSPPYP00000014829 RRM 577 644
ENSPPYP00000014830 RRM 265 306
ENSPPYP00000014830 RRM 324 389
ENSPPYP00000014830 RRM 417 483
ENSPPYP00000014830 RRM 503 570

Links

Other RRM family RBPs
Other Pongo pygmaeus RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSSSCG00000016275 Sus scrofa ENSSSCG00000016275 I 0.930
NCL Homo sapiens ENSG00000115053 D 0.867
NCL Gorilla gorilla ENSGGOG00000004300 I 0.867
NCL Pan troglodytes ENSPTRG00000013025 I 0.867
NCL Macaca mulatta ENSMMUG00000018094 I 0.867
NCL Canis familiaris ENSCAFG00000011037 I 0.863
LOC100395223 Callithrix jacchus ENSCJAG00000013538 I 0.863
NCL Pteropus vampyrus ENSPVAG00000000297 I 0.856
NCL Oryctolagus cuniculus ENSOCUG00000004312 I 0.856
Ame_R005385 Ailuropoda melanoleuca Ame_R005385 I 0.856
Q6X9Z0_HORSE Equus caballus ENSECAG00000021868 I 0.852
NCL Bos taurus ENSBTAG00000016174 I 0.852
NCL Tursiops truncatus ENSTTRG00000009094 I 0.848
NCL Tarsius syrichta ENSTSYG00000004355 I 0.848
ENSBTAG00000026909 Bos taurus ENSBTAG00000026909 I 0.833
NCL Microcebus murinus ENSMICG00000002538 I 0.833
ENSETEG00000014756 Echinops telfairi ENSETEG00000014756 I 0.822
ENSETEG00000018937 Echinops telfairi ENSETEG00000018937 I 0.822
NCL Erinaceus europaeus ENSEEUG00000005913 I 0.804
ENSRNOG00000008664 Rattus norvegicus ENSRNOG00000008664 I 0.799
Ncl Rattus norvegicus ENSRNOG00000018273 I 0.796
Ncl Mus musculus ENSMUSG00000026234 I 0.789
Ncl Dipodomys ordii ENSDORG00000012513 I 0.770
NCL Choloepus hoffmanni ENSCHOG00000012860 I 0.754
NCL Cavia porcellus ENSCPOG00000001034 I 0.752
NCL Ornithorhynchus anatinus ENSOANG00000008732 I 0.716
NCL Monodelphis domestica ENSMODG00000002470 I 0.712
NCL Macropus eugenii ENSMEUG00000012335 I 0.712
NCL Loxodonta africana ENSLAFG00000013061 I 0.711
ENSGGOG00000022986 Gorilla gorilla ENSGGOG00000022986 I 0.709
ENSTBEG00000002469 Tupaia belangeri ENSTBEG00000002469 I 0.707
NCL Vicugna pacos ENSVPAG00000001796 I 0.707
ENSTBEG00000001546 Tupaia belangeri ENSTBEG00000001546 I 0.704