CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TNRC6C
(
Tursiops truncatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTTRG00000010828
T42622_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTTRP00000010270
RRM
1561
1625
LVLRNLTPQIDGSTLRTLCLQHGPLITFHLNLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTTIL
Links
Other
RRM
family RBPs
Other
Tursiops truncatus
RBPs
115 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
17978_YNL251C
Saccharomyces mikatae
17978_YNL251C
N
0.000
18402_YNL251C
Saccharomyces paradoxus
18402_YNL251C
N
0.000
19777_Multiple
Saccharomyces bayanus
19777_Multiple
N
0.000
A7TF47_VANPO
Vanderwaltozyma polyspora
A7TF47_VANPO
N
0.000
Cd36_51490
Candida dubliniensis
Cd36_51490
N
0.000
CLUG_00870
Candida lusitaniae
CLUG_00870
N
0.000
CPAG_03345
Candida parapsilosis
CPAG_03345
N
0.000
CTRG_05353
Candida tropicalis
CTRG_05353
N
0.000
KLTH0F02992g
Kluyveromyces thermotolerans
KLTH0F02992g
N
0.000
Kwal_13522
Kluyveromyces waltii
Kwal_13522
N
0.000
NRD1
Saccharomyces cerevisiae
YNL251C
N
0.000
orf19.581
Candida albicans
orf19.581
N
0.000