GSVIVG00011624001 (Vitis vinifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GSVIVG00011624001 T44649_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00011624001 RRM 34 100

Links

Other RRM family RBPs
Other Vitis vinifera RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29682.m000595 Ricinus communis 29682.m000595 N 0.731
30073.m002271 Ricinus communis 30073.m002271 N 0.701
A9PE83_POPTR Populus trichocarpa POPTR_0001s02090 N 0.746
AT4G17720 Arabidopsis thaliana AT4G17720-TAIR-G N 0.706
AT5G46870 Arabidopsis thaliana AT5G46870-TAIR-G N 0.701
B9GZI4_POPTR Populus trichocarpa POPTR_0003s09410 N 0.716
B9HVS9_POPTR Populus trichocarpa POPTR_0010s11420 N 0.761
BGIOSIBCE012743 Oryza indica BGIOSIBCE012743 N 0.710
BRADI1G51740 Brachypodium distachyon BRADI1G51740 N 0.701
chr4.CM0042.1570.nc Lotus japonicus chr4.CM0042.1570.nc N 0.731
Cucsa.174100 Cucumis sativus Cucsa.174100 N 0.776
GRMZM2G114789 Zea mays GRMZM2G114789 N 0.731
GSVIVG00013098001 Vitis vinifera GSVIVG00013098001 N 0.701
GSVIVG00024381001 Vitis vinifera GSVIVG00024381001 N 0.716
LOC_Os03g50560 Oryza sativa LOC_Os03g50560 N 0.710
MDP0000320634 Malus x domestica MDP0000320634 N 0.768
Medtr4g156510 Medicago truncatula Medtr4g156510 N 0.710
Medtr5g029540 Medicago truncatula Medtr5g029540 N 0.716
PDK_20s1373891g001 Phoenix dactylifera PDK_20s1373891g001 N 0.768
PK05006.1 Cannabis sativa PK05006.1 N 0.716
PK28591.1 Cannabis sativa PK28591.1 N 0.710
ppa021083m Prunus persica ppa021083m N 0.768
XM_002865109.1 Arabidopsis lyrata Al_scaffold_0008_128 N 0.716
XM_002867996.1 Arabidopsis lyrata fgenesh2_kg.7__2538__AT4G17720.1 N 0.706