PDK_20s1373891g001 (Phoenix dactylifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PDK_20s1373891g001 T58108_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1373891g001 RRM 47 113

Links

Other RRM family RBPs
Other Phoenix dactylifera RBPs

20 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BGIOSIBCE012743 Oryza indica BGIOSIBCE012743 N 0.806
LOC_Os03g50560 Oryza sativa LOC_Os03g50560 N 0.806
Cucsa.322000 Cucumis sativus Cucsa.322000 N 0.776
ppa021083m Prunus persica ppa021083m N 0.776
GSVIVG00011624001 Vitis vinifera GSVIVG00011624001 N 0.768
MDP0000320634 Malus x domestica MDP0000320634 N 0.761
BRADI1G10760 Brachypodium distachyon BRADI1G10760 N 0.761
SB01G010170 Sorghum bicolor Sb01g010170 N 0.761
GRMZM2G127559 Zea mays GRMZM2G127559 N 0.761
A9PE83_POPTR Populus trichocarpa POPTR_0001s02090 N 0.754
AT1G67950 Arabidopsis thaliana AT1G67950-TAIR-G N 0.746
PK28591.1 Cannabis sativa PK28591.1 N 0.731
Glyma01g01950.1 Glycine max Glyma01g01950.1 N 0.731
XM_002887117.1 Arabidopsis lyrata fgenesh2_kg.2__1062__AT1G67950.2 N 0.731
Medtr5g029540 Medicago truncatula Medtr5g029540 N 0.710
B9HVS9_POPTR Populus trichocarpa POPTR_0010s11420 N 0.710
PK05006.1 Cannabis sativa PK05006.1 N 0.710
PDK_20s1613681g001 Phoenix dactylifera PDK_20s1613681g001 N 0.710
B9GZI4_POPTR Populus trichocarpa POPTR_0003s09410 N 0.710
Glyma09g33960.1 Glycine max Glyma09g33960.1 N 0.701