GSVIVG00018314001 (Vitis vinifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GSVIVG00018314001 T44685_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00018314001 RRM 234 304
GSVIVT00018314001 RRM 314 382
GSVIVT00018314001 RRM 411 479

Links

Other RRM family RBPs
Other Vitis vinifera RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29709.m001182 Ricinus communis 29709.m001182 N 0.947
AC202489_30 Medicago truncatula AC202489_30 N 0.856
AT2G44710 Arabidopsis thaliana AT2G44710-TAIR-G N 0.771
B9GP81_POPTR Populus trichocarpa POPTR_0002s14050 N 0.957
B9MV49_POPTR Populus trichocarpa POPTR_0014s05040 N 0.928
BRADI5G17270 Brachypodium distachyon BRADI5G17270 N 0.770
cassava12984.valid.m1 Manihot esculenta cassava12984.valid.m1 N 0.962
cassava12985.valid.m1 Manihot esculenta cassava12985.valid.m1 N 0.962
Cucsa.256720 Cucumis sativus Cucsa.256720 N 0.904
Glyma03g25630.1 Glycine max Glyma03g25630.1 N 0.727
Glyma07g13210.1 Glycine max Glyma07g13210.1 N 0.732
Glyma09g38020.1 Glycine max Glyma09g38020.1 N 0.785
Glyma18g48360.1 Glycine max Glyma18g48360.1 N 0.789
GRMZM2G019919 Zea mays GRMZM2G019919 N 0.775
GSVIVG00015774001 Vitis vinifera GSVIVG00015774001 N 0.743
LOC_Os04g45930 Oryza sativa LOC_Os04g45930 N 0.818
MDP0000173498 Malus x domestica MDP0000173498 N 0.871
Medtr7g092780 Medicago truncatula Medtr7g092780 N 0.742
mgf012382m Mimulus guttatus mgf012382m N 0.843
PDK_20s1454181g001 Phoenix dactylifera PDK_20s1454181g001 N 0.914
PK21303.1 Cannabis sativa PK21303.1 N 0.914
ppa002214m Prunus persica ppa002214m N 0.900
Sb06g024100 Sorghum bicolor Sb06g024100 N 0.794
XM_002880085.1 Arabidopsis lyrata fgenesh2_kg.4__2661__AT2G44710.1 N 0.776