ppa002214m (Prunus persica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ppa002214m T58327_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ppa002214m RRM 119 189
ppa002214m RRM 199 267
ppa002214m RRM 296 363

Links

Other RRM family RBPs
Other Prunus persica RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000173498 Malus x domestica MDP0000173498 N 0.933
GSVIVG00018314001 Vitis vinifera GSVIVG00018314001 N 0.900
B9GP81_POPTR Populus trichocarpa POPTR_0002s14050 N 0.894
cassava12985.valid.m1 Manihot esculenta cassava12985.valid.m1 N 0.894
cassava12984.valid.m1 Manihot esculenta cassava12984.valid.m1 N 0.894
29709.m001182 Ricinus communis 29709.m001182 N 0.885
Cucsa.256720 Cucumis sativus Cucsa.256720 N 0.885
B9MV49_POPTR Populus trichocarpa POPTR_0014s05040 N 0.861
PK21303.1 Cannabis sativa PK21303.1 N 0.856
PDK_20s1454181g001 Phoenix dactylifera PDK_20s1454181g001 N 0.841
mgf012382m Mimulus guttatus mgf012382m N 0.823
AC202489_30 Medicago truncatula AC202489_30 N 0.808
Glyma18g48360.1 Glycine max Glyma18g48360.1 N 0.760
LOC_Os04g45930 Oryza sativa LOC_Os04g45930 N 0.755
AT2G44710 Arabidopsis thaliana AT2G44710-TAIR-G N 0.752
XM_002880085.1 Arabidopsis lyrata fgenesh2_kg.4__2661__AT2G44710.1 N 0.748
Glyma09g38020.1 Glycine max Glyma09g38020.1 N 0.745
Sb06g024100 Sorghum bicolor Sb06g024100 N 0.745
GRMZM2G019919 Zea mays GRMZM2G019919 N 0.722
GSVIVG00015774001 Vitis vinifera GSVIVG00015774001 N 0.715
BRADI5G17270 Brachypodium distachyon BRADI5G17270 N 0.712
Glyma07g13210.1 Glycine max Glyma07g13210.1 N 0.707
Glyma03g25630.1 Glycine max Glyma03g25630.1 N 0.702