AC202489_30 (Medicago truncatula)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AC202489_30 T54416_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AC202489_30.1 RRM 217 287
AC202489_30.1 RRM 297 365
AC202489_30.1 RRM 394 461

Links

Other RRM family RBPs
Other Medicago truncatula RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
B9GP81_POPTR Populus trichocarpa POPTR_0002s14050 N 0.861
GSVIVG00018314001 Vitis vinifera GSVIVG00018314001 N 0.856
cassava12984.valid.m1 Manihot esculenta cassava12984.valid.m1 N 0.856
cassava12985.valid.m1 Manihot esculenta cassava12985.valid.m1 N 0.856
29709.m001182 Ricinus communis 29709.m001182 N 0.851
B9MV49_POPTR Populus trichocarpa POPTR_0014s05040 N 0.841
Cucsa.256720 Cucumis sativus Cucsa.256720 N 0.822
ppa002214m Prunus persica ppa002214m N 0.808
PK21303.1 Cannabis sativa PK21303.1 N 0.803
Glyma18g48360.1 Glycine max Glyma18g48360.1 N 0.798
PDK_20s1454181g001 Phoenix dactylifera PDK_20s1454181g001 N 0.798
MDP0000173498 Malus x domestica MDP0000173498 N 0.793
Glyma09g38020.1 Glycine max Glyma09g38020.1 N 0.793
Glyma03g25630.1 Glycine max Glyma03g25630.1 N 0.788
Glyma07g13210.1 Glycine max Glyma07g13210.1 N 0.784
mgf012382m Mimulus guttatus mgf012382m N 0.766
LOC_Os04g45930 Oryza sativa LOC_Os04g45930 N 0.755
Medtr7g092780 Medicago truncatula Medtr7g092780 N 0.755
Sb06g024100 Sorghum bicolor Sb06g024100 N 0.721
BRADI5G17270 Brachypodium distachyon BRADI5G17270 N 0.716
XM_002880085.1 Arabidopsis lyrata fgenesh2_kg.4__2661__AT2G44710.1 N 0.705
AT2G44710 Arabidopsis thaliana AT2G44710-TAIR-G N 0.705