29709.m001182 (Ricinus communis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 29709.m001182 T48677_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
29709.m001182 RRM 215 285
29709.m001182 RRM 295 363
29709.m001182 RRM 392 459

Links

Other RRM family RBPs
Other Ricinus communis RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava12984.valid.m1 Manihot esculenta cassava12984.valid.m1 N 0.966
cassava12985.valid.m1 Manihot esculenta cassava12985.valid.m1 N 0.966
GSVIVG00018314001 Vitis vinifera GSVIVG00018314001 N 0.947
B9GP81_POPTR Populus trichocarpa POPTR_0002s14050 N 0.942
B9MV49_POPTR Populus trichocarpa POPTR_0014s05040 N 0.913
PDK_20s1454181g001 Phoenix dactylifera PDK_20s1454181g001 N 0.885
ppa002214m Prunus persica ppa002214m N 0.885
PK21303.1 Cannabis sativa PK21303.1 N 0.885
Cucsa.256720 Cucumis sativus Cucsa.256720 N 0.885
MDP0000173498 Malus x domestica MDP0000173498 N 0.856
AC202489_30 Medicago truncatula AC202489_30 N 0.851
mgf012382m Mimulus guttatus mgf012382m N 0.818
LOC_Os04g45930 Oryza sativa LOC_Os04g45930 N 0.784
Glyma18g48360.1 Glycine max Glyma18g48360.1 N 0.784
Glyma09g38020.1 Glycine max Glyma09g38020.1 N 0.769
Sb06g024100 Sorghum bicolor Sb06g024100 N 0.764
XM_002880085.1 Arabidopsis lyrata fgenesh2_kg.4__2661__AT2G44710.1 N 0.752
AT2G44710 Arabidopsis thaliana AT2G44710-TAIR-G N 0.748
BRADI5G17270 Brachypodium distachyon BRADI5G17270 N 0.740
GRMZM2G019919 Zea mays GRMZM2G019919 N 0.737
GSVIVG00015774001 Vitis vinifera GSVIVG00015774001 N 0.724
Glyma03g25630.1 Glycine max Glyma03g25630.1 N 0.716
Medtr7g092780 Medicago truncatula Medtr7g092780 N 0.716
Glyma07g13210.1 Glycine max Glyma07g13210.1 N 0.712