estExt_fgenesh1_pm.C_sca_54_chr3_4_00013 (Nectria haematococca)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_pm.C_sca_54_chr3_4_00013 T50740_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pm.C_sca_54_chr3_4_00013 RRM 233 298

Links

Other RRM family RBPs
Other Nectria haematococca RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CHGG_06140 Chaetomium globosum CHGG_06140 N 0.746
estExt_fgenesh1_pg.C_50213 Cryphonectria parasitica estExt_fgenesh1_pg.C_50213 N 0.761
estExt_fgenesh2_pg.C_70098 Neurospora discreta estExt_fgenesh2_pg.C_70098 N 0.731
estExt_Genewise1Plus.C_22014 Trichoderma atroviride estExt_Genewise1Plus.C_22014 N 0.806
fgenesh1_kg.2_#_606_#_2320_1_CCWO_CCWP_EXTA Myceliophthora thermophila fgenesh1_kg.2_#_606_#_2320_1_CCWO_CCWP_EXTA N 0.864
fgenesh1_pg.C_scaffold_1000369 Trichoderma virens fgenesh1_pg.C_scaffold_1000369 N 0.791
fgenesh1_pg.C_scaffold_45000041 Neurospora tetrasperma fgenesh1_pg.C_scaffold_45000041 N 0.731
fgenesh2_pm.1_#_1388 Thielavia terrestris fgenesh2_pm.1_#_1388 N 0.761
fgenesh5_pg.C_scaffold_6000164 Trichoderma reesei fgenesh5_pg.C_scaffold_6000164 N 0.821
FGSG_12577 Fusarium graminearum FGSG_12577 N 0.866
FOXG_15630 Fusarium oxysporum FOXG_15630 N 0.881
FVEG_13092 Fusarium verticillioides FVEG_13092 N 0.851
GLRG_02677 Colletotrichum graminicola GLRG_02677 N 0.806
MGG_10567 Magnaporthe oryzae MGG_10567 N 0.731
NCU03007 Neurospora crassa NCU03007 N 0.731
Pa_1_15820 Podospora anserina Pa_1_15820 N 0.818
VDAG_01644 Verticillium dahliae VDAG_01644 N 0.731