fgenesh5_pg.C_scaffold_6000164 (Trichoderma reesei)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh5_pg.C_scaffold_6000164 T52356_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh5_pg.C_scaffold_6000164 RRM 237 302

Links

Other RRM family RBPs
Other Trichoderma reesei RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.C_scaffold_1000369 Trichoderma virens fgenesh1_pg.C_scaffold_1000369 N 0.970
FOXG_15630 Fusarium oxysporum FOXG_15630 N 0.939
GLRG_02677 Colletotrichum graminicola GLRG_02677 N 0.924
estExt_Genewise1Plus.C_22014 Trichoderma atroviride estExt_Genewise1Plus.C_22014 N 0.924
FGSG_12577 Fusarium graminearum FGSG_12577 N 0.924
VDAG_01644 Verticillium dahliae VDAG_01644 N 0.909
FVEG_13092 Fusarium verticillioides FVEG_13092 N 0.909
MGG_10567 Magnaporthe oryzae MGG_10567 N 0.879
NCU03007 Neurospora crassa NCU03007 N 0.864
estExt_fgenesh2_pg.C_70098 Neurospora discreta estExt_fgenesh2_pg.C_70098 N 0.864
fgenesh1_pg.C_scaffold_45000041 Neurospora tetrasperma fgenesh1_pg.C_scaffold_45000041 N 0.864
CHGG_06140 Chaetomium globosum CHGG_06140 N 0.864
fgenesh2_pm.1_#_1388 Thielavia terrestris fgenesh2_pm.1_#_1388 N 0.864
estExt_fgenesh1_pg.C_50213 Cryphonectria parasitica estExt_fgenesh1_pg.C_50213 N 0.848
estExt_fgenesh1_pm.C_sca_54_chr3_4_00013 Nectria haematococca estExt_fgenesh1_pm.C_sca_54_chr3_4_00013 N 0.821
fgenesh1_kg.2_#_606_#_2320_1_CCWO_CCWP_EXTA Myceliophthora thermophila fgenesh1_kg.2_#_606_#_2320_1_CCWO_CCWP_EXTA N 0.776
BC1G_07906 Botrytis cinerea BC1G_07906 N 0.773
SS1G_03468 Sclerotinia sclerotiorum SS1G_03468 N 0.773
UREG_02520 Uncinocarpus reesii UREG_02520 N 0.758
CIMG_08445 Coccidioides immitis CIMG_08445 N 0.758
CPSG_08272 Coccidioides posadasii CPSG_08272 N 0.758
PABG_03629 Paracoccidioides brasiliensis PABG_03629 N 0.758
BDBG_08699 Blastomyces dermatitidis BDBG_08699 N 0.742
Pa_1_15820 Podospora anserina Pa_1_15820 N 0.731
ACLA_054770 Aspergillus clavatus CADACLAG00005233 N 0.727
MCYG_02745 Microsporum canis MCYG_02745 N 0.727
MGYG_08476 Microsporum gypseum MGYG_08476 N 0.712
HCAG_07565 Histoplasma capsulatum HCAG_07565 N 0.712