estExt_Genewise1Plus.C_22014 (Trichoderma atroviride)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1Plus.C_22014 T51426_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_22014 RRM 239 304

Links

Other RRM family RBPs
Other Trichoderma atroviride RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
FGSG_12577 Fusarium graminearum FGSG_12577 N 0.939
fgenesh5_pg.C_scaffold_6000164 Trichoderma reesei fgenesh5_pg.C_scaffold_6000164 N 0.924
FOXG_15630 Fusarium oxysporum FOXG_15630 N 0.924
fgenesh1_pg.C_scaffold_1000369 Trichoderma virens fgenesh1_pg.C_scaffold_1000369 N 0.909
VDAG_01644 Verticillium dahliae VDAG_01644 N 0.894
FVEG_13092 Fusarium verticillioides FVEG_13092 N 0.894
GLRG_02677 Colletotrichum graminicola GLRG_02677 N 0.879
fgenesh2_pm.1_#_1388 Thielavia terrestris fgenesh2_pm.1_#_1388 N 0.879
estExt_fgenesh1_pg.C_50213 Cryphonectria parasitica estExt_fgenesh1_pg.C_50213 N 0.864
CHGG_06140 Chaetomium globosum CHGG_06140 N 0.848
NCU03007 Neurospora crassa NCU03007 N 0.833
fgenesh1_pg.C_scaffold_45000041 Neurospora tetrasperma fgenesh1_pg.C_scaffold_45000041 N 0.833
MGG_10567 Magnaporthe oryzae MGG_10567 N 0.833
estExt_fgenesh2_pg.C_70098 Neurospora discreta estExt_fgenesh2_pg.C_70098 N 0.833
estExt_fgenesh1_pm.C_sca_54_chr3_4_00013 Nectria haematococca estExt_fgenesh1_pm.C_sca_54_chr3_4_00013 N 0.806
SS1G_03468 Sclerotinia sclerotiorum SS1G_03468 N 0.803
BC1G_07906 Botrytis cinerea BC1G_07906 N 0.803
fgenesh1_kg.2_#_606_#_2320_1_CCWO_CCWP_EXTA Myceliophthora thermophila fgenesh1_kg.2_#_606_#_2320_1_CCWO_CCWP_EXTA N 0.761
MCYG_02745 Microsporum canis MCYG_02745 N 0.742
Pa_1_15820 Podospora anserina Pa_1_15820 N 0.731
ACLA_054770 Aspergillus clavatus CADACLAG00005233 N 0.727
MGYG_08476 Microsporum gypseum MGYG_08476 N 0.727
ARB_05996 Arthroderma benhamiae ARB_05996 N 0.712
HCAG_07565 Histoplasma capsulatum HCAG_07565 N 0.712
BDBG_08699 Blastomyces dermatitidis BDBG_08699 N 0.712
AO090011000290 Aspergillus oryzae CADAORAG00005058 N 0.712
AFLA_041240 Aspergillus flavus CADAFLAG00005451 N 0.712
TRV_06346 Trichophyton verrucosum TRV_06346 N 0.712
TERG_05432 Trichophyton rubrum TERG_05432 N 0.712
UREG_02520 Uncinocarpus reesii UREG_02520 N 0.712