CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MGG_10567
(
Magnaporthe oryzae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MGG_10567
T29783_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGG_10567T0
RRM
216
281
LFVTGVEDDLPEHKVRDHFKTFGKIKSLVCSHMSHCAFVNYETREAAENAAMECKGRAVIAGCPLR
Links
Other
RRM
family RBPs
Other
Magnaporthe oryzae
RBPs
24 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
fgenesh5_pg.C_scaffold_6000164
Trichoderma reesei
fgenesh5_pg.C_scaffold_6000164
N
0.879
VDAG_01644
Verticillium dahliae
VDAG_01644
N
0.879
fgenesh1_pg.C_scaffold_45000041
Neurospora tetrasperma
fgenesh1_pg.C_scaffold_45000041
N
0.848
estExt_fgenesh1_pg.C_50213
Cryphonectria parasitica
estExt_fgenesh1_pg.C_50213
N
0.848
FOXG_15630
Fusarium oxysporum
FOXG_15630
N
0.848
FVEG_13092
Fusarium verticillioides
FVEG_13092
N
0.848
fgenesh1_pg.C_scaffold_1000369
Trichoderma virens
fgenesh1_pg.C_scaffold_1000369
N
0.848
FGSG_12577
Fusarium graminearum
FGSG_12577
N
0.848
fgenesh2_pm.1_#_1388
Thielavia terrestris
fgenesh2_pm.1_#_1388
N
0.848
estExt_fgenesh2_pg.C_70098
Neurospora discreta
estExt_fgenesh2_pg.C_70098
N
0.848
NCU03007
Neurospora crassa
NCU03007
N
0.848
CHGG_06140
Chaetomium globosum
CHGG_06140
N
0.833
GLRG_02677
Colletotrichum graminicola
GLRG_02677
N
0.833
estExt_Genewise1Plus.C_22014
Trichoderma atroviride
estExt_Genewise1Plus.C_22014
N
0.833
fgenesh1_kg.2_#_606_#_2320_1_CCWO_CCWP_EXTA
Myceliophthora thermophila
fgenesh1_kg.2_#_606_#_2320_1_CCWO_CCWP_EXTA
N
0.746
estExt_fgenesh1_pm.C_sca_54_chr3_4_00013
Nectria haematococca
estExt_fgenesh1_pm.C_sca_54_chr3_4_00013
N
0.731
Pa_1_15820
Podospora anserina
Pa_1_15820
N
0.731
ACLA_054770
Aspergillus clavatus
CADACLAG00005233
N
0.712
UREG_02520
Uncinocarpus reesii
UREG_02520
N
0.712
BDBG_08699
Blastomyces dermatitidis
BDBG_08699
N
0.712
SS1G_03468
Sclerotinia sclerotiorum
SS1G_03468
N
0.712
BC1G_07906
Botrytis cinerea
BC1G_07906
N
0.712
CIMG_08445
Coccidioides immitis
CIMG_08445
N
0.712
CPSG_08272
Coccidioides posadasii
CPSG_08272
N
0.712