estExt_Genewise1.C_30147 (Volvox carteri)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1.C_30147 T51241_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_30147 RRM 191 261

Links

Other RRM family RBPs
Other Volvox carteri RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCING00000006773 Ciona intestinalis ENSCING00000006773 I 0.704
estExt_fgenesh2_pg.C_360096 Branchiostoma floridae estExt_fgenesh2_pg.C_360096 I 0.732
estExt_fgenesh2_pg.C_7640002 Branchiostoma floridae estExt_fgenesh2_pg.C_7640002 I 0.732
estExt_Genewise1Plus.C_1180017 Capitella teleta estExt_Genewise1Plus.C_1180017 I 0.704
fgenesh1_pg.C_scaffold_11000034 Phytophthora ramorum fgenesh1_pg.C_scaffold_11000034 N 0.704
fgenesh1_pg.C_scaffold_23000018 Phytophthora capsici fgenesh1_pg.C_scaffold_23000018 N 0.732
pasa_Sanger_mRNA18521 Chlamydomonas reinhardtii pasa_Sanger_mRNA18521 N 0.972
PITG_12876 Phytophthora infestans PITG_12876 N 0.718
RBM42 Takifugu rubripes ENSTRUG00000004663 I 0.704
RBM42 Tetraodon nigroviridis ENSTNIG00000011669 I 0.704
RBM42 Oryzias latipes ENSORLG00000003387 I 0.704
RBM42 Gasterosteus aculeatus ENSGACG00000004170 I 0.704
SPPG_03010 Spizellomyces punctatus SPPG_03010 I 0.746
s_467614 Phytophthora sojae s_467614 N 0.732