SPPG_03010 (Spizellomyces punctatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SPPG_03010 T30824_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ENSXETG00000017599
M237_0.6 		Xenopus tropicalis WACUAC RNAcompete
Ray et al.(2013)
RNCMPT00282 		0.761
RBM42
M142_0.6 		Homo sapiens AACUAMG RNAcompete
Ray et al.(2013)
RNCMPT00151 		0.761
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
SPPG_03010T0 RRM 180 250

Links

Other RRM family RBPs
Other Spizellomyces punctatus RBPs

104 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh2_pg.C_360096 Branchiostoma floridae estExt_fgenesh2_pg.C_360096 I 0.831
estExt_fgenesh2_pg.C_7640002 Branchiostoma floridae estExt_fgenesh2_pg.C_7640002 I 0.831
RBM42 Tetraodon nigroviridis ENSTNIG00000011669 I 0.789
GP3.076550 Batrachochytrium dendrobatidis GP3.076550 I 0.789
RBM42 Oryzias latipes ENSORLG00000003387 I 0.789
RBM42 Takifugu rubripes ENSTRUG00000004663 I 0.789
RBM42 Gasterosteus aculeatus ENSGACG00000004170 I 0.789
rbm42 Danio rerio ENSDARG00000039910 I 0.775
RBM42 Anolis carolinensis ENSACAG00000005495 I 0.775
e_gw1.16.225.1 Lottia gigantea e_gw1.16.225.1 I 0.775
estExt_Genewise1Plus.C_1180017 Capitella teleta estExt_Genewise1Plus.C_1180017 I 0.775
PHUM106890 Pediculus humanus PHUM106890 I 0.775
RBM42 Procavia capensis ENSPCAG00000013053 I 0.761
ENSPPYG00000009871 Pongo pygmaeus ENSPPYG00000009871 I 0.761
e_gw1.1.2297.1 Mucor circinelloides e_gw1.1.2297.1 N 0.761
Rbm42 Mus musculus ENSMUSG00000036733 I 0.761
RBM42 Oryctolagus cuniculus ENSOCUG00000003337 I 0.761
tag-262 Caenorhabditis elegans Y54H5A.3 I 0.761
RBM42 Ochotona princeps ENSOPRG00000001229 I 0.761
RBM42 Pteropus vampyrus ENSPVAG00000012815 I 0.761
RBM42 Spermophilus tridecemlineatus ENSSTOG00000013050 I 0.761
WUBG_05387 Wuchereria bancrofti WUBG_05387 I 0.761
RBM42 Tarsius syrichta ENSTSYG00000014688 I 0.761
RBM42 Monodelphis domestica ENSMODG00000013957 I 0.761
RBM42 Sus scrofa ENSSSCG00000002905 I 0.761
ENSXETG00000017599 Xenopus tropicalis ENSXETG00000017599 D 0.761
Rbm42 Rattus norvegicus ENSRNOG00000024278 I 0.761
RBM42 Sorex araneus ENSSARG00000010724 I 0.761
RBM42 Pan troglodytes ENSPTRG00000010852 I 0.761
RBM42 Otolemur garnettii ENSOGAG00000004144 I 0.761
RBM42 Macaca mulatta ENSMMUG00000018954 I 0.761
CBG21313 Caenorhabditis briggsae CBG21313 I 0.761
CBN12017 Caenorhabditis brenneri CBN12017 I 0.761
CRE29329 Caenorhabditis remanei CRE29329 I 0.761
amel4_ncbi_hmm2520 Apis mellifera amel4_ncbi_hmm2520 I 0.761
LOAG_04208 Loa loa LOAG_04208 I 0.761
Bm1_40380 Brugia malayi Bm1_40380 I 0.761
XP_002167334.1 Hydra magnipapillata XP_002167334.1 I 0.761
Minc13155 Meloidogyne incognita Minc13155 I 0.761
RBM42 Canis familiaris ENSCAFG00000006925 I 0.761
RBM42_BOVIN Bos taurus ENSBTAG00000013440 I 0.761
RBM42 Erinaceus europaeus ENSEEUG00000004841 I 0.761
RBM42 Homo sapiens ENSG00000126254 D 0.761
RBM42 Gorilla gorilla ENSGGOG00000009972 I 0.761
ENSMEUG00000016300 Macropus eugenii ENSMEUG00000016300 I 0.761
Ame_R009099 Ailuropoda melanoleuca Ame_R009099 I 0.761
LOC100051102 Equus caballus ENSECAG00000018215 I 0.761
RBM42 Callithrix jacchus ENSCJAG00000010220 I 0.761
RBM42 Microcebus murinus ENSMICG00000009880 I 0.761
RBM42 Cavia porcellus ENSCPOG00000012365 I 0.761
RBM42 Myotis lucifugus ENSMLUG00000011334 I 0.761
estExt_Genewise1.C_30147 Volvox carteri estExt_Genewise1.C_30147 N 0.746
76581 Helobdella robusta 76581 I 0.746
AAI29698 Xenopus laevis AAI29698 I 0.746
RO3G_12779 Rhizopus oryzae RO3G_12779 N 0.746
BGIBMGA005213 Bombyx mori BGIBMGA005213 I 0.746
BRADI3G49130 Brachypodium distachyon BRADI3G49130 I 0.746
GRMZM2G125529 Zea mays GRMZM2G125529 I 0.746
A2VDB3 Xenopus laevis A2VDB3 I 0.746
CJA09414 Caenorhabditis japonica CJA09414 I 0.746
e_gw.92.129.1 Nematostella vectensis e_gw.92.129.1 I 0.732
e_gw1.30.155.1 Phycomyces blakesleeanus e_gw1.30.155.1 N 0.732
GRMZM2G068255 Zea mays GRMZM2G068255 I 0.732
Glyma10g30900.1 Glycine max Glyma10g30900.1 I 0.732
mgf021739m Mimulus guttatus mgf021739m I 0.732
pasa_Sanger_mRNA18521 Chlamydomonas reinhardtii pasa_Sanger_mRNA18521 N 0.732
Glyma20g36570.1 Glycine max Glyma20g36570.1 I 0.732
LOC_Os08g45240 Oryza sativa LOC_Os08g45240 I 0.732
Ppa-tag-262 Pristionchus pacificus PPA14507 I 0.732
Sb02g038420 Sorghum bicolor Sb02g038420 I 0.732
Cucsa.178480 Cucumis sativus Cucsa.178480 I 0.732
BGIOSIBCE028936 Oryza indica BGIOSIBCE028936 I 0.732
BGIOSIBCE007866 Oryza indica BGIOSIBCE007866 I 0.732
SB04G026430 Sorghum bicolor Sb04g026430 I 0.732
B9IPA5_POPTR Populus trichocarpa POPTR_0019s03570 I 0.732
cassava22669.valid.m1 Manihot esculenta cassava22669.valid.m1 I 0.732
29680.m001693 Ricinus communis 29680.m001693 I 0.732
MDP0000283678 Malus x domestica MDP0000283678 I 0.718
LjSGA_021949.1 Lotus japonicus LjSGA_021949.1 I 0.718
PGTG_02319 Puccinia graminis PGTG_02319 N 0.718
MDP0000320908 Malus x domestica MDP0000320908 I 0.718
AGAP010200 Anopheles gambiae AGAP010200 I 0.718
ppa010477m Prunus persica ppa010477m I 0.718
NCLIV_021850 Neospora caninum NCLIV_021850 N 0.718
BRADI3G12840 Brachypodium distachyon BRADI3G12840 I 0.718
PK16312.1 Cannabis sativa PK16312.1 I 0.718
TGME49_003080 Toxoplasma gondii TGME49_003080 N 0.718
Glyma11g01300.1 Glycine max Glyma11g01300.1 I 0.718
TGGT1_017860 Toxoplasma gondii TGGT1_017860 N 0.718
TGVEG_046310 Toxoplasma gondii TGVEG_046310 N 0.718
gw1.1.892.1 Trichoplax adhaerens gw1.1.892.1 N 0.718
B9I5N8_POPTR Populus trichocarpa POPTR_0013s04390 I 0.718
LOC_Os02g40900 Oryza sativa LOC_Os02g40900 I 0.718
SNAPOd2T00026674001 Oikopleura dioica SNAPOd2T00026674001 N 0.712
gw1.0.1780.1 Selaginella moellendorfii gw1.0.1780.1 I 0.708
DGIL_AUG5s15230g22t1 Acyrtosiphon pisum DGIL_AUG5s15230g22t1 I 0.704
AAI29577 Xenopus laevis AAI29577 I 0.704
AAEL010642 Aedes aegypti AAEL010642 I 0.704
GSVIVG00023509001 Vitis vinifera GSVIVG00023509001 I 0.704
Medtr1g093610 Medicago truncatula Medtr1g093610 I 0.704
GSVIVG00016104001 Vitis vinifera GSVIVG00016104001 I 0.704
ENSCING00000006773 Ciona intestinalis ENSCING00000006773 I 0.704
PDK_20s1301681g005 Phoenix dactylifera PDK_20s1301681g005 I 0.704
PDK_20s1323974g003 Phoenix dactylifera PDK_20s1323974g003 I 0.704