CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
estExt_Genewise1Plus.C_11394
(
Thielavia terrestris
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
estExt_Genewise1Plus.C_11394
T51358_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_11394
RRM
221
291
LRVTNVSEMAEEQELRDMFERFGRVTRVFLAKDRDTGLAKGFAFISFADRNDAIKACNKMDGFGFRHLILR
Links
Other
RRM
family RBPs
Other
Thielavia terrestris
RBPs
52 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AB02569.1
Alternaria brassicicola
AB02569.1
N
0.000
ACLA_054770
Aspergillus clavatus
CADACLAG00005233
N
0.000
AFUA_4G03640
Aspergillus fumigatus
CADAFUAG00001443
N
0.000
ATEG_02173
Aspergillus terreus
CADATEAG00000030
N
0.000
EAT84720.1
Phaeosphaeria nodorum
EAT84720.1
N
0.000
estExt_Genewise1.C_50279
Cochliobolus heterostrophus C5
estExt_Genewise1.C_50279
N
0.000
NFIA_029780
Neosartorya fischeri
CADNFIAG00002898
N
0.000
Pc12g14830
Penicillium chrysogenum
Pc12g14830
N
0.000
SNOG_08444
Stagonospora nodorum
SNOG_08444
N
0.000