Medtr3g159840 (Medicago truncatula)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Medtr3g159840 T54499_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
AT1G76460-TAIR-G
M239_0.6 		Arabidopsis thaliana DGWGUGD RNAcompete
Ray et al.(2013)
RNCMPT00284 		0.868
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr3g159840.1 RRM 31 97

Links

Other RRM family RBPs
Other Medicago truncatula RBPs

114 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL005046 Aedes aegypti AAEL005046 N 0.000
AGAP008433 Anopheles gambiae AGAP008433 N 0.000
amel4_ncbi_hmm11379 Apis mellifera amel4_ncbi_hmm11379 N 0.000
CPIJ014704 Culex quinquefasciatus CPIJ014704 N 0.000
CPIJ019416 Culex quinquefasciatus CPIJ019416 N 0.000
CpipJ_CPIJ014704 Culex pipiens CpipJ_CPIJ014704 N 0.000
CpipJ_CPIJ019416 Culex pipiens CpipJ_CPIJ019416 N 0.000
estExt_Genewise1.C_sca_90322 Lottia gigantea estExt_Genewise1.C_sca_90322 N 0.000
GA10876-RA Drosophila pseudoobscura FBgn0070932 N 0.000
GH13506 Drosophila grimshawi FBgn0120982 N 0.000
PHUM394230 Pediculus humanus PHUM394230 N 0.000
Sjc_0034270 Schistosoma japonicum Sjc_0034270 N 0.000
Smp_064590 Schistosoma mansoni Smp_064590 N 0.000