CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MDP0000943534
(
Malus x domestica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MDP0000943534
T57746_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000943534
RRM
315
378
LEDEVASECAKYGTVTRVLIFEITEPNFPENEAVRIFIQFERPEETTKSLVDLDGRYFGGRVVR
Links
Other
RRM
family RBPs
Other
Malus x domestica
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Bm1_03385
Brugia malayi
Bm1_03385
N
0.000
CBG02238
Caenorhabditis briggsae
CBG02238
N
0.000
CBG11894
Caenorhabditis briggsae
CBG11894
N
0.000
CBN10862
Caenorhabditis brenneri
CBN10862
N
0.000
CBN22260
Caenorhabditis brenneri
CBN22260
N
0.000
cey-2
Caenorhabditis elegans
F46F11.2
N
0.000
cey-3
Caenorhabditis elegans
M01E11.5
N
0.000
CJA04706
Caenorhabditis japonica
CJA04706
N
0.000
CRE03641
Caenorhabditis remanei
CRE03641
N
0.000
CRE03839
Caenorhabditis remanei
CRE03839
N
0.000
LOAG_08235
Loa loa
LOAG_08235
N
0.000