CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
SAMD4B
(
Macaca mulatta
)
SAM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00536 (SAM_1)
IPR021129
ENSMMUG00000023802
T61800_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
SAMD4A
M061_0.6
Homo sapiens
GCKGGHM
RNAcompete
Ray et al.(2013)
RNCMPT00063
0.754
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000031348
SAM
297
357
DGSGMKDVPSWLKSLRLHKYAALFSQMSYEEMMTLTEQHLESQNVTKGARHKIALSIQKLR
Links
Other
SAM
family RBPs
Other
Macaca mulatta
RBPs
80 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL009235
Aedes aegypti
AAEL009235
N
0.000
AGAP005641
Anopheles gambiae
AGAP005641
N
0.000
CG9705
Drosophila melanogaster
FBgn0036661
N
0.000
CPIJ008535
Culex quinquefasciatus
CPIJ008535
N
0.000
CpipJ_CPIJ008535
Culex pipiens
CpipJ_CPIJ008535
N
0.000
GA21978-RA
Drosophila pseudoobscura
FBgn0081963
N
0.000
GD14664
Drosophila simulans
FBgn0186342
N
0.000
GE19874
Drosophila yakuba
FBgn0237204
N
0.000
GF23931
Drosophila ananassae
FBgn0100925
N
0.000
GG13577
Drosophila erecta
FBgn0105847
N
0.000
GH16224
Drosophila grimshawi
FBgn0123695
N
0.000
GI13370
Drosophila mojavensis
FBgn0136127
N
0.000
GJ13199
Drosophila virilis
FBgn0200425
N
0.000
GK16809
Drosophila willistoni
FBgn0218809
N
0.000
GM25657
Drosophila sechellia
FBgn0180514
N
0.000