PK13905.1 (Cannabis sativa)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		PK13905.1 T00351_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK13905.1 CCCH ZF 228 251
PK13905.1 RRM 294 352
PK13905.1 CCCH ZF 361 389

Links

Other CCCH ZF,RRM family RBPs
Other Cannabis sativa RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RNPS1 Arabidopsis thaliana AT1G16610-TAIR-G N 0.000
BRADI2G61380 Brachypodium distachyon BRADI2G61380 N 0.000
BRADI2G39730 Brachypodium distachyon BRADI2G39730 N 0.000
PK27218.1 Cannabis sativa PK27218.1 N 0.000
Glyma15g40710.1 Glycine max Glyma15g40710.1 N 0.000
MDP0000257660 Malus x domestica MDP0000257660 N 0.000
MDP0000286005 Malus x domestica MDP0000286005 N 0.000
cassava34024.m1 Manihot esculenta cassava34024.m1 N 0.000
cassava34023.m1 Manihot esculenta cassava34023.m1 N 0.000
cassava30720.valid.m1 Manihot esculenta cassava30720.valid.m1 N 0.000
cassava30719.valid.m1 Manihot esculenta cassava30719.valid.m1 N 0.000
cassava30718.valid.m1 Manihot esculenta cassava30718.valid.m1 N 0.000
cassava30717.valid.m1 Manihot esculenta cassava30717.valid.m1 N 0.000
BGIOSIBCE005072 Oryza indica BGIOSIBCE005072 N 0.000
BGIOSIBCE017247 Oryza indica BGIOSIBCE017247 N 0.000
LOC_Os05g01540 Oryza sativa LOC_Os05g01540 N 0.000
LOC_Os01g72890 Oryza sativa LOC_Os01g72890 N 0.000
estExt_fgenesh1_pg.C_1180104 Physcomitrella patens estExt_fgenesh1_pg.C_1180104 N 0.000
A9PFW8_POPTR Populus trichocarpa POPTR_0011s14630 N 0.000
ppa006722m Prunus persica ppa006722m N 0.000
ppa006711m Prunus persica ppa006711m N 0.000
30169.m006358 Ricinus communis 30169.m006358 N 0.000
SB03G046480 Sorghum bicolor Sb03g046480 N 0.000
GSVIVG00020424001 Vitis vinifera GSVIVG00020424001 N 0.000
GRMZM2G133926 Zea mays GRMZM2G133926 N 0.000
GRMZM2G060540 Zea mays GRMZM2G060540 N 0.000