PK12342.1 (Cannabis sativa)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 PK12342.1 T01760_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK12342.1 CCCH ZF 110 135

Links

Other CCCH ZF family RBPs
Other Cannabis sativa RBPs

124 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R017931 Ailuropoda melanoleuca Ame_R017931 N 0.808
AB07703.1 Alternaria brassicicola AB07703.1 N 0.731
amel4_ncbi_hmm11607 Apis mellifera amel4_ncbi_hmm11607 N 0.808
ARB_01723 Arthroderma benhamiae ARB_01723 N 0.731
ACL082W Ashbya gossypii ACL082W N 0.000
ATEG_06133 Aspergillus terreus CADATEAG00002525 N 0.731
ZC3HF_BOVIN Bos taurus ENSBTAG00000021762 N 0.808
estExt_gwp.C_6160004 Branchiostoma floridae estExt_gwp.C_6160004 N 0.731
ZC3H15 Callithrix jacchus ENSCJAG00000005931 N 0.808
CAGL0J08679g Candida glabrata CAGL0J08679g N 0.000
ZC3H15 Canis familiaris ENSCAFG00000014494 N 0.808
ENSCPOG00000012965 Cavia porcellus ENSCPOG00000012965 N 0.808
ZC3H15 Choloepus hoffmanni ENSCHOG00000011958 N 0.808
estExt_Genewise1.C_60471 Cochliobolus heterostrophus C5 estExt_Genewise1.C_60471 N 0.731
Zc3h15 Dipodomys ordii ENSDORG00000011664 N 0.808
GD10149 Drosophila simulans FBgn0181924 N 0.769
GK21573 Drosophila willistoni FBgn0223565 N 0.769
LOC100068634 Equus caballus ENSECAG00000017149 N 0.808
ZC3H15 Felis catus ENSFCAG00000008213 N 0.808
ZC3HF_CHICK Gallus gallus ENSGALG00000002670 N 0.808
ZC3H15 Gorilla gorilla ENSGGOG00000000073 N 0.808
ZC3H15 Homo sapiens ENSG00000065548 N 0.808
KLLA0C13673g Kluyveromyces lactis KLLA0C13673g N 0.000
KLTH0G08162g Kluyveromyces thermotolerans KLTH0G08162g N 0.000
Kwal_2969 Kluyveromyces waltii Kwal_2969 N 0.000
SAKL0E09966g Lachancea kluyveri SAKL0E09966g N 0.000
ENSLAFG00000001563 Loxodonta africana ENSLAFG00000001563 N 0.769
ZC3H15 Macaca mulatta ENSMMUG00000017248 N 0.808
MGG_07010 Magnaporthe oryzae MGG_07010 N 0.731
ZC3H15 Meleagris gallopavo ENSMGAG00000004447 N 0.808
ZC3H15 Microcebus murinus ENSMICG00000014245 N 0.808
MCYG_02954 Microsporum canis MCYG_02954 N 0.731
MGYG_00125 Microsporum gypseum MGYG_00125 N 0.731
ITGAV Monodelphis domestica ENSMODG00000010653 N 0.808
Zc3h15 Mus musculus ENSMUSG00000027091 N 0.808
ZC3H15 Myotis lucifugus ENSMLUG00000007741 N 0.808
nasonia_NCBI_hmm1144383 Nasonia vitripennis nasonia_NCBI_hmm1144383 N 0.808
NCU01795 Neurospora crassa NCU01795 N 0.000
estExt_Genewise1.C_110154 Neurospora discreta estExt_Genewise1.C_110154 N 0.000
estExt_fgenesh1_pm.C_130118 Neurospora tetrasperma estExt_fgenesh1_pm.C_130118 N 0.000
ENSOPRG00000015790 Ochotona princeps ENSOPRG00000015790 N 0.808
ZC3H15 Ornithorhynchus anatinus ENSOANG00000015742 N 0.808
ENSOCUG00000011903 Oryctolagus cuniculus ENSOCUG00000011903 N 0.808
BGIOSIBCE004176 Oryza indica BGIOSIBCE004176 N 0.923
LOC_Os01g61830 Oryza sativa LOC_Os01g61830 N 0.923
ZC3H15 Otolemur garnettii ENSOGAG00000002182 N 0.808
ZC3H15 Pan troglodytes ENSPTRG00000012717 N 0.808
gwh2.4.391.1 Phanerochaete chrysosporium gwh2.4.391.1 N 0.731
e_gw1.8.939.1 Pleurotus ostreatus e_gw1.8.939.1 N 0.731
Pa_3_8730 Podospora anserina Pa_3_8730 N 0.731
ENSPPYG00000013004 Pongo pygmaeus ENSPPYG00000013004 N 0.808
ZC3H15 Procavia capensis ENSPCAG00000008499 N 0.808
ZC3H15 Pteropus vampyrus ENSPVAG00000004828 N 0.808
PTTG_08784 Puccinia triticina PTTG_08784 N 0.731
Zc3h15 Rattus norvegicus ENSRNOG00000005256 N 0.808
22901_YOR091W Saccharomyces bayanus 22901_YOR091W N 0.000
Scas_Contig578.9 Saccharomyces castellii Scas_Contig578.9 N 0.000
TMA46 Saccharomyces cerevisiae YOR091W N 0.000
20338_Multiple Saccharomyces mikatae 20338_Multiple N 0.000
20661_YOR091W Saccharomyces paradoxus 20661_YOR091W N 0.000
ZC3H15 Sorex araneus ENSSARG00000012071 N 0.808
SB03G039020 Sorghum bicolor Sb03g039020 N 0.885
ZC3H15 Spermophilus tridecemlineatus ENSSTOG00000006873 N 0.808
SPPG_00188 Spizellomyces punctatus SPPG_00188 N 0.731
e_gw1.2.668.1 Sporobolomyces roseus e_gw1.2.668.1 N 0.731
ZC3H15 Sus scrofa ENSSSCG00000016026 N 0.808
ZC3H15 Taeniopygia guttata ENSTGUG00000011131 N 0.808
ZC3H15 Tarsius syrichta ENSTSYG00000011019 N 0.808
TEQG_08385 Trichophyton equinum TEQG_08385 N 0.731
TERG_01412 Trichophyton rubrum TERG_01412 N 0.731
TESG_03135 Trichophyton tonsurans TESG_03135 N 0.731
TRV_03417 Trichophyton verrucosum TRV_03417 N 0.731
ZC3H15 Tupaia belangeri ENSTBEG00000015530 N 0.808
ZC3H15 Tursiops truncatus ENSTTRG00000012425 N 0.808
ZC3H15 Vicugna pacos ENSVPAG00000006980 N 0.808
AAH77826 Xenopus laevis AAH77826 N 0.808
BAD89267 Xenopus laevis BAD89267 N 0.808
Q6DD06 Xenopus laevis Q6DD06 N 0.808
ZYRO0C15598g Zygosaccharomyces rouxii ZYRO0C15598g N 0.000