CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MKRN1
(
Dasypus novemcinctus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSDNOG00000019564
T02492_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000015171
CCCH ZF
56
81
TKQVTCRYFMHGVCKEGDNCRYSHDL
ENSDNOP00000015171
CCCH ZF
85
110
PYGVVCKYFQRGYCIYGDRCRYEHSK
ENSDNOP00000015171
CCCH ZF
210
235
TKKQLCPYAAVGECRYGENCVYLHGD
Links
Other
CCCH ZF
family RBPs
Other
Dasypus novemcinctus
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
A2VDX6_BOVIN
Bos taurus
ENSBTAG00000008306
N
0.910
MKRN1
Echinops telfairi
ENSETEG00000007348
N
0.885
ENSGGOG00000024940
Gorilla gorilla
ENSGGOG00000024940
N
0.885
MKRN1
Homo sapiens
ENSG00000133606
N
0.987
Mkrn1
Mus musculus
ENSMUSG00000029922
N
0.987
MKRN1
Pteropus vampyrus
ENSPVAG00000011185
N
0.987
MKRN1
Tupaia belangeri
ENSTBEG00000004564
N
0.910