MKRN1 (Homo sapiens)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSG00000133606 T02642_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000255977 CCCH ZF 56 81
ENSP00000255977 CCCH ZF 85 110
ENSP00000255977 CCCH ZF 209 234
ENSP00000255977 CCCH ZF 367 392
ENSP00000416369 CCCH ZF 56 81
ENSP00000416369 CCCH ZF 85 110
ENSP00000416369 CCCH ZF 209 234
ENSP00000417640 CCCH ZF 56 81
ENSP00000417640 CCCH ZF 85 107
ENSP00000417797 CCCH ZF 56 81
ENSP00000417797 CCCH ZF 85 107
ENSP00000417863 CCCH ZF 1 17
ENSP00000417863 CCCH ZF 21 46
ENSP00000417863 CCCH ZF 145 170
ENSP00000417863 CCCH ZF 303 328
ENSP00000418588 CCCH ZF 1 17
ENSP00000418588 CCCH ZF 21 46
ENSP00000418588 CCCH ZF 145 165
ENSP00000418620 CCCH ZF 14 32
ENSP00000418620 CCCH ZF 36 61
ENSP00000418864 CCCH ZF 1 17
ENSP00000418864 CCCH ZF 21 46
ENSP00000418864 CCCH ZF 145 170
ENSP00000419843 CCCH ZF 1 17
ENSP00000419843 CCCH ZF 21 46
ENSP00000419894 CCCH ZF 1 17
ENSP00000419894 CCCH ZF 21 43

Links

Other CCCH ZF family RBPs
Other Homo sapiens RBPs

48 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSGGOG00000023977 Gorilla gorilla ENSGGOG00000023977 N 1.000
MKRN1 Tursiops truncatus ENSTTRG00000009528 N 0.990
MKRN1 Choloepus hoffmanni ENSCHOG00000011015 N 0.990
MKRN1 Sus scrofa ENSSSCG00000016498 N 0.990
XR_024878.1 Pan troglodytes ENSPTRG00000019766 N 0.990
MKRN1 Dasypus novemcinctus ENSDNOG00000019564 N 0.987
Mkrn1 Mus musculus ENSMUSG00000029922 N 0.981
ENSPPYG00000018057 Pongo pygmaeus ENSPPYG00000018057 N 0.979
MKRN1 Pteropus vampyrus ENSPVAG00000011185 N 0.974
MKRN1 Loxodonta africana ENSLAFG00000018408 N 0.971
MKRN1 Macaca mulatta ENSMMUG00000010420 N 0.969
ENSCAFG00000003953 Canis familiaris ENSCAFG00000003953 N 0.969
MKRN1 Felis catus ENSFCAG00000013043 N 0.969
Q68FR1_RAT Rattus norvegicus ENSRNOG00000009280 N 0.962
Ame_R001963 Ailuropoda melanoleuca Ame_R001963 N 0.959
LOC100065893 Equus caballus ENSECAG00000017929 N 0.959
MKRN1 Tupaia belangeri ENSTBEG00000004564 N 0.958
MKRN1 Myotis lucifugus ENSMLUG00000006053 N 0.956
MKRN1 Microcebus murinus ENSMICG00000002114 N 0.952
ENSOCUG00000010180 Oryctolagus cuniculus ENSOCUG00000010180 N 0.949
MKRN1 Ochotona princeps ENSOPRG00000010353 N 0.933
ENSCPOG00000000948 Cavia porcellus ENSCPOG00000000948 N 0.933
A2VDX6_BOVIN Bos taurus ENSBTAG00000008306 N 0.931
MKRN1 Echinops telfairi ENSETEG00000007348 N 0.930
MKRN1 Tarsius syrichta ENSTSYG00000009996 N 0.907
ENSOGAG00000009877 Otolemur garnettii ENSOGAG00000009877 N 0.897
MKRN1 Procavia capensis ENSPCAG00000014683 N 0.897
MKRN1_MACEU Macropus eugenii ENSMEUG00000007399 N 0.885
MKRN1 Anolis carolinensis ENSACAG00000010934 N 0.885
ENSMODG00000013686 Monodelphis domestica ENSMODG00000013686 N 0.885
ENSPPYG00000020255 Pongo pygmaeus ENSPPYG00000020255 N 0.885
MKRN1 Sorex araneus ENSSARG00000013683 N 0.879
Q9PTI4_CHICK Gallus gallus ENSGALG00000012852 N 0.875
ENSGGOG00000024940 Gorilla gorilla ENSGGOG00000024940 N 0.872
MKRN1 Callithrix jacchus ENSCJAG00000004068 N 0.837
ENSMMUG00000001017 Macaca mulatta ENSMMUG00000001017 N 0.837
MKRN1 Meleagris gallopavo ENSMGAG00000013208 N 0.827
MKRN1 Taeniopygia guttata ENSTGUG00000011669 N 0.806
MKRN1 Oryzias latipes ENSORLG00000012765 N 0.800
Q6GLT5 Xenopus laevis Q6GLT5 N 0.788
AAH74368 Xenopus laevis AAH74368 N 0.788
mkrn1 Danio rerio ENSDARG00000041665 N 0.774
MKRN1 Gasterosteus aculeatus ENSGACG00000019227 N 0.755
NP_001072050.1 Takifugu rubripes ENSTRUG00000012057 N 0.745
MKRN1 Tetraodon nigroviridis ENSTNIG00000007231 N 0.736
ENSOCUG00000013132 Oryctolagus cuniculus ENSOCUG00000013132 N 0.700
ENSOCUG00000021607 Oryctolagus cuniculus ENSOCUG00000021607 N 0.700