CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
MKRN1
(
Pteropus vampyrus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSPVAG00000011185
T03288_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPVAP00000010542
CCCH ZF
53
78
TKQVTCRYFMHGVCKEGDNCRYSHDL
ENSPVAP00000010542
CCCH ZF
82
107
PYGVVCKYFQRGYCIYGDRCRYEHSK
ENSPVAP00000010542
CCCH ZF
205
230
TKQQLCPYAAVGECRYGENCVYLHGD
Links
Other
CCCH ZF
family RBPs
Other
Pteropus vampyrus
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MKRN1
Dasypus novemcinctus
ENSDNOG00000019564
N
0.987
MKRN1
Homo sapiens
ENSG00000133606
N
0.974
Mkrn1
Mus musculus
ENSMUSG00000029922
N
0.974
A2VDX6_BOVIN
Bos taurus
ENSBTAG00000008306
N
0.897
MKRN1
Tupaia belangeri
ENSTBEG00000004564
N
0.897
MKRN1
Echinops telfairi
ENSETEG00000007348
N
0.872
ENSGGOG00000024940
Gorilla gorilla
ENSGGOG00000024940
N
0.872