B0F0H3 (Xenopus laevis)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 B0F0H3 T06723_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
B0F0H3 CCCH ZF 3 28
B0F0H3 CCCH ZF 34 57
B0F0H3 CCCH ZF 160 183
B0F0H3 CCCH ZF 314 341

Links

Other CCCH ZF family RBPs
Other Xenopus laevis RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MKRN2 Anolis carolinensis ENSACAG00000013310 N 0.731
Q2YDI8_BOVIN Bos taurus ENSBTAG00000004512 N 0.740
MKRN2 Canis familiaris ENSCAFG00000004967 N 0.712
MKRN2 Choloepus hoffmanni ENSCHOG00000005438 N 0.731
mkrn2 Danio rerio ENSDARG00000007630 N 0.757
Q8UWH3_CHICK Gallus gallus ENSGALG00000004991 N 0.714
MKRN2 Gasterosteus aculeatus ENSGACG00000003396 N 0.765
MKRN2 Gorilla gorilla ENSGGOG00000000429 N 0.718
MKRN2 Homo sapiens ENSG00000075975 N 0.718
MKRN2 Macaca mulatta ENSMMUG00000009536 N 0.718
Mkrn2 Mus musculus ENSMUSG00000000439 N 0.728
MKRN2 Ochotona princeps ENSOPRG00000003501 N 0.718
MKRN2 Oryctolagus cuniculus ENSOCUG00000014171 N 0.712
MKRN2 Oryzias latipes ENSORLG00000009824 N 0.712
MKRN2 Pan troglodytes ENSPTRG00000014634 N 0.718
ENSPPYG00000013387 Pongo pygmaeus ENSPPYG00000013387 N 0.712
MKRN2 Procavia capensis ENSPCAG00000016175 N 0.721
Mkrn2 Rattus norvegicus ENSRNOG00000009176 N 0.738
NP_001072101.1 Takifugu rubripes ENSTRUG00000003156 N 0.725
MKRN2 Vicugna pacos ENSVPAG00000011064 N 0.702
AAI06425 Xenopus laevis AAI06425 N 0.971
ABR68861 Xenopus laevis ABR68861 N 1.000