LOC_Os05g17360 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os05g17360 T11414_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os05g17360.1 CCHC ZF 318 335

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

630 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ARB_04665 Arthroderma benhamiae ARB_04665 N 0.000
fgenesh1_pm.00868_#_106 Aspergillus carbonarius fgenesh1_pm.00868_#_106 N 0.000
ACLA_065300 Aspergillus clavatus CADACLAG00006222 N 0.000
AFLA_071390 Aspergillus flavus CADAFLAG00008563 N 0.000
AFUA_7G02230 Aspergillus fumigatus CADAFUAG00001190 N 0.000
ANIA_09090 Aspergillus nidulans CADANIAG00009524 N 0.000
An12g00410 Aspergillus niger CADANGAG00009490 N 0.000
AO090038000602 Aspergillus oryzae CADAORAG00009349 N 0.000
BDBG_04017 Blastomyces dermatitidis BDBG_04017 N 0.000
BC1G_12954 Botrytis cinerea BC1G_12954 N 0.000
CIMG_07756 Coccidioides immitis CIMG_07756 N 0.000
CPSG_09340 Coccidioides posadasii CPSG_09340 N 0.000
estExt_Genewise1.C_280098 Cochliobolus heterostrophus C5 estExt_Genewise1.C_280098 N 0.000
GLRG_08999 Colletotrichum graminicola GLRG_08999 N 0.000
estExt_Genewise1Plus.C_61164 Cryphonectria parasitica estExt_Genewise1Plus.C_61164 N 0.000
FGSG_05737 Fusarium graminearum FGSG_05737 N 0.000
FOXG_08762 Fusarium oxysporum FOXG_08762 N 0.000
FVEG_05907 Fusarium verticillioides FVEG_05907 N 0.000
HCAG_04410 Histoplasma capsulatum HCAG_04410 N 0.000
MGG_08741 Magnaporthe oryzae MGG_08741 N 0.000
MGYG_05892 Microsporum gypseum MGYG_05892 N 0.000
estExt_Genewise1.C_22136 Myceliophthora thermophila estExt_Genewise1.C_22136 N 0.000
estExt_Genewise1.C_90098 Mycosphaerella fijiensis estExt_Genewise1.C_90098 N 0.000
estExt_Genewise1Plus.C_chr_10431 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_10431 N 0.000
estExt_Genewise1Plus.C_sca_18_chr2_1_00442 Nectria haematococca estExt_Genewise1Plus.C_sca_18_chr2_1_00442 N 0.000
NFIA_114950 Neosartorya fischeri CADNFIAG00010593 N 0.000
NCU00768 Neurospora crassa NCU00768 N 0.000
estExt_fgenesh2_pg.C_40625 Neurospora discreta estExt_fgenesh2_pg.C_40625 N 0.000
estExt_fgenesh1_pm.C_520029 Neurospora tetrasperma estExt_fgenesh1_pm.C_520029 N 0.000
PABG_01162 Paracoccidioides brasiliensis PABG_01162 N 0.000
PMAA_010670 Penicillium marneffei PMAA_010670 N 0.000
EAT81253.1 Phaeosphaeria nodorum EAT81253.1 N 0.000
PredSwiss_CON474.2 Pneumocystis carinii PredSwiss_CON474.2 N 0.000
PredSwiss_ASS2010_2387.1 Pneumocystis carinii PredSwiss_ASS2010_2387.1 N 0.000
Pa_1_5920 Podospora anserina Pa_1_5920 N 0.000
PTRG_04758 Pyrenophora tritici repentis PTRG_04758 N 0.000
SJAG_00474 Schizosaccharomyces japonicus SJAG_00474 N 0.000
SNOG_11545 Stagonospora nodorum SNOG_11545 N 0.000
estExt_fgenesh2_kg.C_40081 Thielavia terrestris estExt_fgenesh2_kg.C_40081 N 0.000
estExt_Genewise1.C_80620 Trichoderma atroviride estExt_Genewise1.C_80620 N 0.000
e_gw1.3.851.1 Trichoderma reesei e_gw1.3.851.1 N 0.000
gw1.13.164.1 Trichoderma virens gw1.13.164.1 N 0.000
GSTUMT00001670001 Tuber melanosporum GSTUMT00001670001 N 0.000
UREG_02108 Uncinocarpus reesii UREG_02108 N 0.000
VDBG_02406 Verticillium albo atrum VDBG_02406 N 0.000
VDAG_02878 Verticillium dahliae VDAG_02878 N 0.000