LOC_Os05g26230 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os05g26230 T11504_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os05g26230.1 CCHC ZF 310 327

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

630 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB08288.1 Alternaria brassicicola AB08288.1 N 0.000
ARB_06649 Arthroderma benhamiae ARB_06649 N 0.000
ACLA_012010 Aspergillus clavatus CADACLAG00000982 N 0.000
ANIA_04665 Aspergillus nidulans CADANIAG00005768 N 0.000
An07g05140 Aspergillus niger CADANGAG00005786 N 0.000
ATEG_05773 Aspergillus terreus CADATEAG00002943 N 0.000
BDBG_01138 Blastomyces dermatitidis BDBG_01138 N 0.000
BC1G_09608 Botrytis cinerea BC1G_09608 N 0.000
CHGG_06716 Chaetomium globosum CHGG_06716 N 0.000
CIMG_06780 Coccidioides immitis CIMG_06780 N 0.000
CPSG_07351 Coccidioides posadasii CPSG_07351 N 0.000
estExt_Genewise1.C_160643 Cochliobolus heterostrophus C5 estExt_Genewise1.C_160643 N 0.000
GLRG_07641 Colletotrichum graminicola GLRG_07641 N 0.000
CC1G_01457 Coprinopsis cinerea CC1G_01457 N 0.000
estExt_fgenesh1_kg.C_50230 Cryphonectria parasitica estExt_fgenesh1_kg.C_50230 N 0.000
estExt_Genewise1Plus.C_110324 Daphnia pulex estExt_Genewise1Plus.C_110324 N 0.000
FGSG_09419 Fusarium graminearum FGSG_09419 N 0.000
FOXG_06071 Fusarium oxysporum FOXG_06071 N 0.000
FVEG_03939 Fusarium verticillioides FVEG_03939 N 0.000
gw1.4.2036.1 Heterobasidion annosum gw1.4.2036.1 N 0.000
HCAG_00719 Histoplasma capsulatum HCAG_00719 N 0.000
MGG_03086 Magnaporthe oryzae MGG_03086 N 0.000
MCYG_01624 Microsporum canis MCYG_01624 N 0.000
MGYG_04448 Microsporum gypseum MGYG_04448 N 0.000
gw1.1.2440.1 Mucor circinelloides gw1.1.2440.1 N 0.000
e_gw1.1.4685.1 Myceliophthora thermophila e_gw1.1.4685.1 N 0.000
fgenesh1_pm.C_scaffold_1000287 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_1000287 N 0.000
estExt_fgenesh1_pg.C_chr_10724 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_10724 N 0.000
e_gw1.18.2245.1 Nectria haematococca e_gw1.18.2245.1 N 0.000
NFIA_078760 Neosartorya fischeri CADNFIAG00007376 N 0.000
NCU02467 Neurospora crassa NCU02467 N 0.000
estExt_Genewise1.C_21128 Neurospora discreta estExt_Genewise1.C_21128 N 0.000
estExt_Genewise1Plus.C_180344 Neurospora tetrasperma estExt_Genewise1Plus.C_180344 N 0.000
PABG_03870 Paracoccidioides brasiliensis PABG_03870 N 0.000
Pc22g16450 Penicillium chrysogenum Pc22g16450 N 0.000
PMAA_079770 Penicillium marneffei PMAA_079770 N 0.000
EAT89749.2 Phaeosphaeria nodorum EAT89749.2 N 0.000
gw1.4.1321.1 Pleurotus ostreatus gw1.4.1321.1 N 0.000
PredSwiss_CON1238.1 Pneumocystis carinii PredSwiss_CON1238.1 N 0.000
Pa_1_22200 Podospora anserina Pa_1_22200 N 0.000
PTRG_01927 Pyrenophora tritici repentis PTRG_01927 N 0.000
SS1G_03313 Sclerotinia sclerotiorum SS1G_03313 N 0.000
e_gw1.2.1042.1 Sporobolomyces roseus e_gw1.2.1042.1 N 0.000
SNOG_03018 Stagonospora nodorum SNOG_03018 N 0.000
e_gw1.1.5996.1 Thielavia terrestris e_gw1.1.5996.1 N 0.000
gw1.5.1175.1 Trichoderma atroviride gw1.5.1175.1 N 0.000
gw1.16.255.1 Trichoderma reesei gw1.16.255.1 N 0.000
e_gw1.12.826.1 Trichoderma virens e_gw1.12.826.1 N 0.000
TEQG_02324 Trichophyton equinum TEQG_02324 N 0.000
TERG_07863 Trichophyton rubrum TERG_07863 N 0.000
TESG_00774 Trichophyton tonsurans TESG_00774 N 0.000
TRV_02420 Trichophyton verrucosum TRV_02420 N 0.000
GSTUMT00000089001 Tuber melanosporum GSTUMT00000089001 N 0.000
UREG_03685 Uncinocarpus reesii UREG_03685 N 0.000
VDBG_02287 Verticillium albo atrum VDBG_02287 N 0.000
VDAG_02758 Verticillium dahliae VDAG_02758 N 0.000