LOC_Os09g13800 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os09g13800 T12121_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os09g13800.1 CCHC ZF 269 286

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

158 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB08315.1 Alternaria brassicicola AB08315.1 N 0.000
ADR062W Ashbya gossypii ADR062W N 0.000
fgenesh1_pm.00118_#_26 Aspergillus carbonarius fgenesh1_pm.00118_#_26 N 0.000
ACLA_033580 Aspergillus clavatus CADACLAG00003610 N 0.000
AFUA_3G05570 Aspergillus fumigatus CADAFUAG00005783 N 0.000
ANIA_03447 Aspergillus nidulans CADANIAG00009587 N 0.000
An11g11070 Aspergillus niger CADANGAG00009424 N 0.000
AO090020000028 Aspergillus oryzae CADAORAG00006562 N 0.000
ATEG_08978 Aspergillus terreus CADATEAG00006440 N 0.000
CTRG_02259 Candida tropicalis CTRG_02259 N 0.000
CIMG_10872 Coccidioides immitis CIMG_10872 N 0.000
CPSG_06815 Coccidioides posadasii CPSG_06815 N 0.000
estExt_fgenesh1_pg.C_160206 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_160206 N 0.000
HCAG_10294 Histoplasma capsulatum HCAG_10294 N 0.000
KLTH0E11836g Kluyveromyces thermotolerans KLTH0E11836g N 0.000
SAKL0H10846g Lachancea kluyveri SAKL0H10846g N 0.000
MCYG_08235 Microsporum canis MCYG_08235 N 0.000
MGYG_05636 Microsporum gypseum MGYG_05636 N 0.000
NFIA_071620 Neosartorya fischeri CADNFIAG00006536 N 0.000
PABG_05614 Paracoccidioides brasiliensis PABG_05614 N 0.000
Pc20g08250 Penicillium chrysogenum Pc20g08250 N 0.000
PMAA_005110 Penicillium marneffei PMAA_005110 N 0.000
EAT89389.2 Phaeosphaeria nodorum EAT89389.2 N 0.000
PTRG_01963 Pyrenophora tritici repentis PTRG_01963 N 0.000
SNOG_02658 Stagonospora nodorum SNOG_02658 N 0.000
TEQG_01582 Trichophyton equinum TEQG_01582 N 0.000
TERG_02518 Trichophyton rubrum TERG_02518 N 0.000
GSTUMT00003772001 Tuber melanosporum GSTUMT00003772001 N 0.000
UREG_06970 Uncinocarpus reesii UREG_06970 N 0.000
YALI0B12540g Yarrowia lipolytica YALI0B12540g N 0.000