Aqu1.204126 (Amphimedon queenslandica)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 Aqu1.204126 T13248_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Aqu1.204126 CCHC ZF 131 148

Links

Other CCHC ZF family RBPs
Other Amphimedon queenslandica RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.C_scaffold_1519000001 Capitella teleta fgenesh1_pg.C_scaffold_1519000001 N 0.722
MDP0000237521 Malus x domestica MDP0000237521 N 0.722
nasonia_NCBI_hmm136934 Nasonia vitripennis nasonia_NCBI_hmm136934 N 0.722
nasonia_NCBI_hmm264134 Nasonia vitripennis nasonia_NCBI_hmm264134 N 0.722
nasonia_NCBI_hmm266134 Nasonia vitripennis nasonia_NCBI_hmm266134 N 0.722
nasonia_NCBI_hmm96174 Nasonia vitripennis nasonia_NCBI_hmm96174 N 0.722
LOC_Os12g07910 Oryza sativa LOC_Os12g07910 N 0.722
LOC_Os11g45610 Oryza sativa LOC_Os11g45610 N 0.722
LOC_Os11g11860 Oryza sativa LOC_Os11g11860 N 0.722
LOC_Os11g06960 Oryza sativa LOC_Os11g06960 N 0.722
LOC_Os10g29420 Oryza sativa LOC_Os10g29420 N 0.722
LOC_Os10g07578 Oryza sativa LOC_Os10g07578 N 0.778
LOC_Os07g05600 Oryza sativa LOC_Os07g05600 N 0.722
LOC_Os04g24570 Oryza sativa LOC_Os04g24570 N 0.722
PGTG_05870 Puccinia graminis PGTG_05870 N 0.722