CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CpipJ_CPIJ014324
(
Culex pipiens
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
CpipJ_CPIJ014324
T17610_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CpipJ_CPIJ014324-RA
KH
98
183
VKILVPIKEHPRFNFVGKLLGPKGNTLKRLQEDTMCKMAILGRGSMKDRKKEEELRASMDTKYAHLSDDLHVEVSANGPPAEVHAR
Links
Other
KH
family RBPs
Other
Culex pipiens
RBPs
17 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DGIL_AUG5s14032g4t1
Acyrtosiphon pisum
DGIL_AUG5s14032g4t1
N
0.701
AAEL009694
Aedes aegypti
AAEL009694
N
0.724
AGAP003356
Anopheles gambiae
AGAP003356
N
0.733
amel4_ncbi_hmm3083
Apis mellifera
amel4_ncbi_hmm3083
N
0.747
BGIBMGA014155
Bombyx mori
BGIBMGA014155
N
0.784
CPIJ014324
Culex quinquefasciatus
CPIJ014324
N
1.000
GF11894
Drosophila ananassae
FBgn0088934
N
0.713
GG21049
Drosophila erecta
FBgn0113232
N
0.701
GH21368
Drosophila grimshawi
FBgn0128830
N
0.736
CG10384
Drosophila melanogaster
FBgn0034731
N
0.701
GI20563
Drosophila mojavensis
FBgn0143299
N
0.713
GA10291-RA
Drosophila pseudoobscura
FBgn0070349
N
0.701
GM15914
Drosophila sechellia
FBgn0170830
N
0.701
GJ19910
Drosophila virilis
FBgn0207052
N
0.736
GK17902
Drosophila willistoni
FBgn0219901
N
0.724
GE13991
Drosophila yakuba
FBgn0231623
N
0.701
nasonia_NCBI_hmm272534
Nasonia vitripennis
nasonia_NCBI_hmm272534
N
0.782