CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PNO1
(
Sus scrofa
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSSSCG00000008352
T19500_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000008915
KH
176
225
LSRAIGRIAGKGGKTKFTIENVTRTRIVLADVKVHILGSFQNIKMARTAI
Links
Other
KH
family RBPs
Other
Sus scrofa
RBPs
237 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R005457
Ailuropoda melanoleuca
Ame_R005457
N
0.000
AT1G48710
Arabidopsis thaliana
AT1G48710-TAIR-G
N
0.000
AT3G61330
Arabidopsis thaliana
AT3G61330-TAIR-G
N
0.000
AT1G11265
Arabidopsis thaliana
AT1G11265-TAIR-G
N
0.000
AT3G59720
Arabidopsis thaliana
AT3G59720-TAIR-G
N
0.000
AT1G58140
Arabidopsis thaliana
AT1G58140-TAIR-G
N
0.000
ZCCHC2
Canis familiaris
ENSCAFG00000000073
N
0.000
ZCCHC2
Equus caballus
ENSECAG00000014990
N
0.000
ZCCHC2
Erinaceus europaeus
ENSEEUG00000008744
N
0.000
ZCCHC2
Felis catus
ENSFCAG00000010919
N
0.000
nasonia_NCBI_hmm110394
Nasonia vitripennis
nasonia_NCBI_hmm110394
N
0.000
nasonia_NCBI_hmm88784
Nasonia vitripennis
nasonia_NCBI_hmm88784
N
0.000
nasonia_NCBI_hmm253074
Nasonia vitripennis
nasonia_NCBI_hmm253074
N
0.000
nasonia_NCBI_hmm139164
Nasonia vitripennis
nasonia_NCBI_hmm139164
N
0.000
PMAA_015550
Penicillium marneffei
PMAA_015550
N
0.000
PMAA_102830
Penicillium marneffei
PMAA_102830
N
0.000
fgenesh1_pg.C_scaffold_1378000001
Phytophthora ramorum
fgenesh1_pg.C_scaffold_1378000001
N
0.000
fgenesh1_pg.C_scaffold_1682000001
Phytophthora ramorum
fgenesh1_pg.C_scaffold_1682000001
N
0.000
s_451916
Phytophthora sojae
s_451916
N
0.000
s_475569
Phytophthora sojae
s_475569
N
0.000
ZCCHC2
Sus scrofa
ENSSSCG00000004897
N
0.000
ZCCHC2
Tursiops truncatus
ENSTTRG00000013533
N
0.000
ZCCHC2
Vicugna pacos
ENSVPAG00000009934
N
0.000