ISCW016289 (Ixodes scapularis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ISCW016289 T20122_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.704
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ISCW016289-PA KH 2 54
ISCW016289-PA KH 78 140
ISCW016289-PA KH 221 283

Links

Other KH family RBPs
Other Ixodes scapularis RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s5532g9t1 Acyrtosiphon pisum DGIL_AUG5s5532g9t1 I 0.729
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.709
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.704
AGAP004942 Anopheles gambiae AGAP004942 N 0.728
amel4_ncbi_hmm16330 Apis mellifera amel4_ncbi_hmm16330 I 0.774
fgenesh2_pg.scaffold_166000022 Branchiostoma floridae fgenesh2_pg.scaffold_166000022 I 0.766
estExt_gwp.C_3950051 Branchiostoma floridae estExt_gwp.C_3950051 I 0.766
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.704
fgenesh1_pm.C_scaffold_76000004 Capitella teleta fgenesh1_pm.C_scaffold_76000004 I 0.782
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.704
PASA_GEN_0700132 Daphnia pulex PASA_GEN_0700132 I 0.723
GG16232 Drosophila erecta FBgn0108467 N 0.712
GH14429 Drosophila grimshawi FBgn0121905 N 0.712
FBgn0262737 Drosophila melanogaster FBgn0262737 N 0.712
GI13561 Drosophila mojavensis FBgn0136316 N 0.712
GA20351-RA Drosophila pseudoobscura FBgn0080346 N 0.712
GJ11921 Drosophila virilis FBgn0199174 N 0.712
GK10610 Drosophila willistoni FBgn0212625 N 0.712
GE22592 Drosophila yakuba FBgn0239809 N 0.712
LOC100050101 Equus caballus ENSECAG00000012413 I 0.704
PCBP3 Gallus gallus ENSGALG00000013155 I 0.714
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.704
PCBP3 Homo sapiens ENSG00000183570 I 0.704
e_gw1.66.95.1 Lottia gigantea e_gw1.66.95.1 N 0.744
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.704
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.704
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.723
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.704
nasonia_NCBI_hmm938274 Nasonia vitripennis nasonia_NCBI_hmm938274 I 0.749
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.704
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.704
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.704
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.709
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.707
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.704