PCBP3 (Gallus gallus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSGALG00000013155 T18874_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.963
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.894
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.888
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.851
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.851
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000021450 KH 15 75
ENSGALP00000021450 KH 99 162
ENSGALP00000021450 KH 246 308
ENSGALP00000021451 KH 14 74
ENSGALP00000021451 KH 98 161
ENSGALP00000021451 KH 281 343
ENSGALP00000021453 KH 15 75
ENSGALP00000021453 KH 99 162
ENSGALP00000021453 KH 243 305

Links

Other KH family RBPs
Other Gallus gallus RBPs

133 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.995
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.995
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.963
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.963
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.963
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.963
LOC100050101 Equus caballus ENSECAG00000012413 I 0.963
PCBP3 Homo sapiens ENSG00000183570 I 0.963
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.963
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.963
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.963
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.963
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.963
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.963
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.963
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.952
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.952
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.941
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.941
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.941
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.941
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.936
PCBP3 Gallus gallus ENSGALG00000004394 I 0.920
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.920
PCBP3 Ochotona princeps ENSOPRG00000003431 I 0.911
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.894
CAD29864 Xenopus laevis CAD29864 I 0.894
CAB50743 Xenopus laevis CAB50743 I 0.894
AAH84195 Xenopus laevis AAH84195 I 0.894
AAH41241 Xenopus laevis AAH41241 I 0.894
pcbp2 Danio rerio ENSDARG00000013184 D 0.894
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.894
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.888
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.888
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.888
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.888
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.888
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.888
PCBP2 Equus caballus ENSECAG00000022389 I 0.888
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.888
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.888
PCBP2 Homo sapiens ENSG00000197111 D 0.888
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.888
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.888
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.888
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.888
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.888
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.888
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.888
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.888
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.888
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.888
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.888
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.883
PCBP3 Loxodonta africana ENSLAFG00000020835 I 0.883
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.883
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.878
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.878
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.878
Ame_R007160 Ailuropoda melanoleuca Ame_R007160 I 0.872
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.872
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.872
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.872
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.867
PCBP3 Microcebus murinus ENSMICG00000012679 I 0.867
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.862
PCBP3 Otolemur garnettii ENSOGAG00000008044 I 0.862
pcbp3 Danio rerio ENSDARG00000054378 I 0.856
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.851
LOC100050579 Equus caballus ENSECAG00000002544 I 0.851
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.851
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.851
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.851
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.851
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.851
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.851
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.851
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.851
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.851
PCBP1 Homo sapiens ENSG00000169564 D 0.851
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.840
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.840
ENSGACG00000003044 Gasterosteus aculeatus ENSGACG00000003044 I 0.832
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.830
PCBP3 Myotis lucifugus ENSMLUG00000003074 I 0.830
PCBP3 Felis catus ENSFCAG00000014812 I 0.830
LOC100409398 Callithrix jacchus ENSCJAG00000007694 I 0.824
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.824
ENSMODG00000017748 Monodelphis domestica ENSMODG00000017748 I 0.814
PCBP3 Pteropus vampyrus ENSPVAG00000000832 I 0.809
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.805
PCBP2 Echinops telfairi ENSETEG00000014741 I 0.804
PCBP4 Anolis carolinensis ENSACAG00000011701 I 0.800
PCBP2 Macropus eugenii ENSMEUG00000001887 I 0.798
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.789
Ame_R011627 Ailuropoda melanoleuca Ame_R011627 I 0.787
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.783
estExt_gwp.C_3950051 Branchiostoma floridae estExt_gwp.C_3950051 I 0.783
fgenesh2_pg.scaffold_166000022 Branchiostoma floridae fgenesh2_pg.scaffold_166000022 I 0.783
D4ADH2_RAT Rattus norvegicus ENSRNOG00000039295 I 0.778
PCBP4 Oryctolagus cuniculus ENSOCUG00000025336 I 0.774
ENSPPYG00000013822 Pongo pygmaeus ENSPPYG00000013822 I 0.774
Pcbp4 Mus musculus ENSMUSG00000023495 I 0.774
PCBP4 Macaca mulatta ENSMMUG00000022205 I 0.774
PCBP4 Gorilla gorilla ENSGGOG00000012474 I 0.774
PCBP4 Pan troglodytes ENSPTRG00000014983 I 0.774
Pcbp4 Rattus norvegicus ENSRNOG00000012406 I 0.774
A6MK33_CALJA Callithrix jacchus ENSCJAG00000005783 I 0.774
PCBP4_BOVIN Bos taurus ENSBTAG00000018622 I 0.774
LOC100060660 Equus caballus ENSECAG00000024218 I 0.774
PCBP4 Homo sapiens ENSG00000090097 I 0.774
PCBP4 Canis familiaris ENSCAFG00000010019 I 0.774
PCBP4 Taeniopygia guttata ENSTGUG00000006393 I 0.774
PCBP4 Gasterosteus aculeatus ENSGACG00000002664 I 0.772
PCBP4 Tetraodon nigroviridis ENSTNIG00000017887 I 0.772
ENSRNOG00000019487 Rattus norvegicus ENSRNOG00000019487 I 0.772
PCBP4 Cavia porcellus ENSCPOG00000014617 I 0.768
PCBP3 Procavia capensis ENSPCAG00000001454 I 0.761
PCBP3 Tetraodon nigroviridis ENSTNIG00000008872 I 0.753
PCBP3 Echinops telfairi ENSETEG00000015988 I 0.751
PCBP2 Myotis lucifugus ENSMLUG00000009971 I 0.750
PCBP4 Monodelphis domestica ENSMODG00000011790 I 0.742
PCBP4 Oryzias latipes ENSORLG00000003061 I 0.741
fgenesh1_pm.C_scaffold_76000004 Capitella teleta fgenesh1_pm.C_scaffold_76000004 I 0.741
PASA_GEN_0700132 Daphnia pulex PASA_GEN_0700132 I 0.724
nasonia_NCBI_hmm938274 Nasonia vitripennis nasonia_NCBI_hmm938274 I 0.719
ISCW016289 Ixodes scapularis ISCW016289 I 0.714
ENSLAFG00000025534 Loxodonta africana ENSLAFG00000025534 I 0.709
D4A8D6_RAT Rattus norvegicus ENSRNOG00000006713 I 0.708
PCBP2 Tupaia belangeri ENSTBEG00000015592 I 0.707
PCBP1 Taeniopygia guttata ENSTGUG00000016232 I 0.707
ENSMODG00000020653 Monodelphis domestica ENSMODG00000020653 I 0.704