rybpa (Danio rerio)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 ENSDARG00000037773 T26371_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000055037 RanBP ZF 20 46

Links

Other RanBP ZF family RBPs
Other Danio rerio RBPs

91 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R002450 Ailuropoda melanoleuca Ame_R002450 N 0.926
Ame_R009996 Ailuropoda melanoleuca Ame_R009996 N 0.815
YAF2 Anolis carolinensis ENSACAG00000003204 N 0.815
RYBP Anolis carolinensis ENSACAG00000014789 N 0.926
AGAP010288 Anopheles gambiae AGAP010288 N 0.714
Q0VC56_BOVIN Bos taurus ENSBTAG00000015025 N 0.815
gw.67.121.1 Branchiostoma floridae gw.67.121.1 N 0.778
fgenesh2_pg.scaffold_670000003 Branchiostoma floridae fgenesh2_pg.scaffold_670000003 N 0.778
LOC100410479 Callithrix jacchus ENSCJAG00000017762 N 0.815
LOC100393237 Callithrix jacchus ENSCJAG00000015125 N 0.926
RYBP Canis familiaris ENSCAFG00000006441 N 0.926
YAF2 Cavia porcellus ENSCPOG00000015156 N 0.815
RYBP Choloepus hoffmanni ENSCHOG00000011528 N 0.926
YAF2 Choloepus hoffmanni ENSCHOG00000002266 N 0.815
yaf2 Danio rerio ENSDARG00000015966 N 0.815
rybpb Danio rerio ENSDARG00000053459 N 0.963
fgenesh1_pg.C_scaffold_97000016 Daphnia pulex fgenesh1_pg.C_scaffold_97000016 N 0.714
RYBP Dasypus novemcinctus ENSDNOG00000015175 N 0.926
GF11639 Drosophila ananassae FBgn0088679 N 0.750
GG22783 Drosophila erecta FBgn0114948 N 0.750
GH19772 Drosophila grimshawi FBgn0127236 N 0.750
RYBP Drosophila melanogaster FBgn0034763 N 0.750
GI20311 Drosophila mojavensis FBgn0143047 N 0.750
GL11369 Drosophila persimilis FBgn0148978 N 0.750
GA11466-RA Drosophila pseudoobscura FBgn0071517 N 0.750
GM15940 Drosophila sechellia FBgn0170856 N 0.750
GD11693 Drosophila simulans FBgn0183433 N 0.750
GJ22038 Drosophila virilis FBgn0209152 N 0.750
GK21447 Drosophila willistoni FBgn0223439 N 0.750
GE14012 Drosophila yakuba FBgn0231642 N 0.750
YAF2 Echinops telfairi ENSETEG00000001634 N 0.750
RYBP Echinops telfairi ENSETEG00000015145 N 0.889
LOC100062395 Equus caballus ENSECAG00000000266 N 0.926
YAF2 Erinaceus europaeus ENSEEUG00000004713 N 0.778
ENSEEUG00000011620 Erinaceus europaeus ENSEEUG00000011620 N 0.926
Q5ZKC5_CHICK Gallus gallus ENSGALG00000009540 N 0.815
RYBP Gallus gallus ENSGALG00000007790 N 0.926
YAF2 Gasterosteus aculeatus ENSGACG00000004103 N 0.815
RYBP Gasterosteus aculeatus ENSGACG00000011809 N 0.852
YAF2 Gorilla gorilla ENSGGOG00000007230 N 0.815
193935 Helobdella robusta 193935 N 0.815
RYBP Homo sapiens ENSG00000163602 N 0.926
YAF2 Homo sapiens ENSG00000015153 N 0.815
e_gw1.50.264.1 Lottia gigantea e_gw1.50.264.1 N 0.704
YAF2 Loxodonta africana ENSLAFG00000014339 N 0.778
RYBP Loxodonta africana ENSLAFG00000003133 N 0.889
YAF2 Macaca mulatta ENSMMUG00000010868 N 0.815
RYBP Macaca mulatta ENSMMUG00000007128 N 0.926
YAF2 Macropus eugenii ENSMEUG00000012378 N 0.815
RYBP Microcebus murinus ENSMICG00000014365 N 0.926
RYBP Monodelphis domestica ENSMODG00000003921 N 0.926
YAF2 Monodelphis domestica ENSMODG00000008906 N 0.815
ENSMUSG00000055763 Mus musculus ENSMUSG00000055763 N 0.857
Rybp Mus musculus ENSMUSG00000072872 N 0.926
Yaf2 Mus musculus ENSMUSG00000022634 N 0.815
ENSMLUG00000015085 Myotis lucifugus ENSMLUG00000015085 N 0.926
RYBP Oryctolagus cuniculus ENSOCUG00000011730 N 0.926
YAF2 Oryctolagus cuniculus ENSOCUG00000007321 N 0.741
YAF2 Oryzias latipes ENSORLG00000013064 N 0.815
YAF2 Oryzias latipes ENSORLG00000003255 N 0.926
RYBP Otolemur garnettii ENSOGAG00000007809 N 0.926
RYBP Pan troglodytes ENSPTRG00000015105 N 0.926
YAF2 Pan troglodytes ENSPTRG00000004837 N 0.815
ENSPPYG00000013718 Pongo pygmaeus ENSPPYG00000013718 N 0.926
ENSPPYG00000004421 Pongo pygmaeus ENSPPYG00000004421 N 0.815
YAF2 Pteropus vampyrus ENSPVAG00000016833 N 0.815
RYBP Pteropus vampyrus ENSPVAG00000012905 N 0.926
Yaf2 Rattus norvegicus ENSRNOG00000004773 N 0.815
Rybp Rattus norvegicus ENSRNOG00000005353 N 0.926
RYBP Sorex araneus ENSSARG00000011312 N 0.926
YAF2 Spermophilus tridecemlineatus ENSSTOG00000007224 N 0.778
YAF2 Taeniopygia guttata ENSTGUG00000005817 N 0.815
RYBP Taeniopygia guttata ENSTGUG00000009932 N 0.926
RYBP Takifugu rubripes ENSTRUG00000009347 N 0.852
YAF2 Takifugu rubripes ENSTRUG00000016786 N 0.852
YAF2 Takifugu rubripes ENSTRUG00000016767 N 0.815
RYBP Tetraodon nigroviridis ENSTNIG00000007355 N 0.852
YAF2 Tetraodon nigroviridis ENSTNIG00000015988 N 0.852
YAF2 Tetraodon nigroviridis ENSTNIG00000018505 N 0.815
RYBP Tupaia belangeri ENSTBEG00000003789 N 0.926
RYBP Tursiops truncatus ENSTTRG00000005375 N 0.926
YAF2 Tursiops truncatus ENSTTRG00000001376 N 0.815
RYBP Vicugna pacos ENSVPAG00000007715 N 0.889
YAF2 Vicugna pacos ENSVPAG00000012039 N 0.815
AAI69358 Xenopus laevis AAI69358 N 0.857
AAI55956 Xenopus laevis AAI55956 N 0.857
AAI06269 Xenopus laevis AAI06269 N 0.852
AAH73220 Xenopus laevis AAH73220 N 0.852
AAI69386 Xenopus laevis AAI69386 N 0.857
rybp Xenopus tropicalis ENSXETG00000015914 N 0.926
yaf2 Xenopus tropicalis ENSXETG00000006795 N 0.852