CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
YAF2
(
Oryctolagus cuniculus
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSOCUG00000007321
T26652_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000006329
RanBP ZF
12
38
EGYWDCSVCTFRNGAEAFKCMMCEVRK
Links
Other
RanBP ZF
family RBPs
Other
Oryctolagus cuniculus
RBPs
96 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R009996
Ailuropoda melanoleuca
Ame_R009996
N
0.926
Ame_R002450
Ailuropoda melanoleuca
Ame_R002450
N
0.815
YAF2
Anolis carolinensis
ENSACAG00000003204
N
0.926
RYBP
Anolis carolinensis
ENSACAG00000014789
N
0.815
AGAP010288
Anopheles gambiae
AGAP010288
N
0.750
amel4_ncbi_hmm6926
Apis mellifera
amel4_ncbi_hmm6926
N
0.759
Q0VC56_BOVIN
Bos taurus
ENSBTAG00000015025
N
0.926
gw.67.121.1
Branchiostoma floridae
gw.67.121.1
N
0.852
fgenesh2_pg.scaffold_670000003
Branchiostoma floridae
fgenesh2_pg.scaffold_670000003
N
0.852
LOC100393237
Callithrix jacchus
ENSCJAG00000015125
N
0.815
LOC100410479
Callithrix jacchus
ENSCJAG00000017762
N
0.926
RYBP
Canis familiaris
ENSCAFG00000006441
N
0.815
YAF2
Cavia porcellus
ENSCPOG00000015156
N
0.926
RYBP
Choloepus hoffmanni
ENSCHOG00000011528
N
0.815
YAF2
Choloepus hoffmanni
ENSCHOG00000002266
N
0.926
yaf2
Danio rerio
ENSDARG00000015966
N
0.852
rybpa
Danio rerio
ENSDARG00000037773
N
0.741
rybpb
Danio rerio
ENSDARG00000053459
N
0.778
fgenesh1_pg.C_scaffold_97000016
Daphnia pulex
fgenesh1_pg.C_scaffold_97000016
N
0.786
RYBP
Dasypus novemcinctus
ENSDNOG00000015175
N
0.815
GF11639
Drosophila ananassae
FBgn0088679
N
0.750
GG22783
Drosophila erecta
FBgn0114948
N
0.750
GH19772
Drosophila grimshawi
FBgn0127236
N
0.750
RYBP
Drosophila melanogaster
FBgn0034763
N
0.750
GI20311
Drosophila mojavensis
FBgn0143047
N
0.750
GL11369
Drosophila persimilis
FBgn0148978
N
0.714
GA11466-RA
Drosophila pseudoobscura
FBgn0071517
N
0.714
GM15940
Drosophila sechellia
FBgn0170856
N
0.750
GD11693
Drosophila simulans
FBgn0183433
N
0.750
GJ22038
Drosophila virilis
FBgn0209152
N
0.750
GK21447
Drosophila willistoni
FBgn0223439
N
0.750
GE14012
Drosophila yakuba
FBgn0231642
N
0.750
RYBP
Echinops telfairi
ENSETEG00000015145
N
0.778
YAF2
Echinops telfairi
ENSETEG00000001634
N
0.821
LOC100062395
Equus caballus
ENSECAG00000000266
N
0.815
ENSEEUG00000011620
Erinaceus europaeus
ENSEEUG00000011620
N
0.815
YAF2
Erinaceus europaeus
ENSEEUG00000004713
N
0.852
RYBP
Gallus gallus
ENSGALG00000007790
N
0.815
Q5ZKC5_CHICK
Gallus gallus
ENSGALG00000009540
N
0.926
YAF2
Gasterosteus aculeatus
ENSGACG00000004103
N
0.852
RYBP
Gasterosteus aculeatus
ENSGACG00000011809
N
0.815
YAF2
Gorilla gorilla
ENSGGOG00000007230
N
0.926
193935
Helobdella robusta
193935
N
0.741
YAF2
Homo sapiens
ENSG00000015153
N
0.926
RYBP
Homo sapiens
ENSG00000163602
N
0.815
YAF2
Loxodonta africana
ENSLAFG00000014339
N
0.889
RYBP
Loxodonta africana
ENSLAFG00000003133
N
0.778
YAF2
Macaca mulatta
ENSMMUG00000010868
N
0.926
RYBP
Macaca mulatta
ENSMMUG00000007128
N
0.815
YAF2
Macropus eugenii
ENSMEUG00000012378
N
0.926
RYBP
Microcebus murinus
ENSMICG00000014365
N
0.815
RYBP
Monodelphis domestica
ENSMODG00000003921
N
0.815
YAF2
Monodelphis domestica
ENSMODG00000008906
N
0.926
Yaf2
Mus musculus
ENSMUSG00000022634
N
0.926
ENSMUSG00000055763
Mus musculus
ENSMUSG00000055763
N
0.750
Rybp
Mus musculus
ENSMUSG00000072872
N
0.815
ENSMLUG00000015085
Myotis lucifugus
ENSMLUG00000015085
N
0.778
nasonia_NCBI_hmm137104
Nasonia vitripennis
nasonia_NCBI_hmm137104
N
0.724
estExt_fgenesh1_pg.C_1000062
Nematostella vectensis
estExt_fgenesh1_pg.C_1000062
N
0.724
RYBP
Oryctolagus cuniculus
ENSOCUG00000011730
N
0.815
YAF2
Oryzias latipes
ENSORLG00000013064
N
0.815
YAF2
Oryzias latipes
ENSORLG00000003255
N
0.778
RYBP
Otolemur garnettii
ENSOGAG00000007809
N
0.815
YAF2
Pan troglodytes
ENSPTRG00000004837
N
0.926
RYBP
Pan troglodytes
ENSPTRG00000015105
N
0.815
ENSPPYG00000013718
Pongo pygmaeus
ENSPPYG00000013718
N
0.815
ENSPPYG00000004421
Pongo pygmaeus
ENSPPYG00000004421
N
0.926
YAF2
Pteropus vampyrus
ENSPVAG00000016833
N
0.926
RYBP
Pteropus vampyrus
ENSPVAG00000012905
N
0.815
Yaf2
Rattus norvegicus
ENSRNOG00000004773
N
0.926
Rybp
Rattus norvegicus
ENSRNOG00000005353
N
0.815
RYBP
Sorex araneus
ENSSARG00000011312
N
0.815
YAF2
Spermophilus tridecemlineatus
ENSSTOG00000007224
N
0.852
XP_001183392.1
Strongylocentrotus purpuratus
XP_001183392.1
N
0.741
XP_780545.1
Strongylocentrotus purpuratus
XP_780545.1
N
0.741
YAF2
Taeniopygia guttata
ENSTGUG00000005817
N
0.889
RYBP
Taeniopygia guttata
ENSTGUG00000009932
N
0.815
RYBP
Takifugu rubripes
ENSTRUG00000009347
N
0.852
YAF2
Takifugu rubripes
ENSTRUG00000016767
N
0.815
YAF2
Takifugu rubripes
ENSTRUG00000016786
N
0.815
RYBP
Tetraodon nigroviridis
ENSTNIG00000007355
N
0.852
YAF2
Tetraodon nigroviridis
ENSTNIG00000015988
N
0.815
YAF2
Tetraodon nigroviridis
ENSTNIG00000018505
N
0.815
amel4_ncbi_hmm6926
Tribolium castaneum
amel4_ncbi_hmm6926
N
0.759
RYBP
Tupaia belangeri
ENSTBEG00000003789
N
0.815
RYBP
Tursiops truncatus
ENSTTRG00000005375
N
0.815
YAF2
Tursiops truncatus
ENSTTRG00000001376
N
0.889
YAF2
Vicugna pacos
ENSVPAG00000012039
N
0.926
RYBP
Vicugna pacos
ENSVPAG00000007715
N
0.778
AAH73220
Xenopus laevis
AAH73220
N
0.852
AAI06269
Xenopus laevis
AAI06269
N
0.852
AAI55956
Xenopus laevis
AAI55956
N
0.750
AAI69358
Xenopus laevis
AAI69358
N
0.750
AAI69386
Xenopus laevis
AAI69386
N
0.750
yaf2
Xenopus tropicalis
ENSXETG00000006795
N
0.852
rybp
Xenopus tropicalis
ENSXETG00000015914
N
0.815