CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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YAF2
(
Takifugu rubripes
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSTRUG00000016767
T26864_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000042934
RanBP ZF
21
47
EGFWDCSVCTYKNTAEAFKCMMCDVRK
ENSTRUP00000042935
RanBP ZF
19
45
EGFWDCSVCTYKNTAEAFKCMMCDVRK
ENSTRUP00000042936
RanBP ZF
19
45
EGFWDCSVCTYKNTAEAFKCMMCDVRK
Links
Other
RanBP ZF
family RBPs
Other
Takifugu rubripes
RBPs
103 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BRADI4G20900
Brachypodium distachyon
BRADI4G20900
N
0.000
BRADI4G40040
Brachypodium distachyon
BRADI4G40040
N
0.000
PK11097.1
Cannabis sativa
PK11097.1
N
0.000
MDP0000319338
Malus x domestica
MDP0000319338
N
0.000
BGIOSIBCE034058
Oryza indica
BGIOSIBCE034058
N
0.000
BGIOSIBCE036105
Oryza indica
BGIOSIBCE036105
N
0.000
LOC_Os12g12360
Oryza sativa
LOC_Os12g12360
N
0.000
LOC_Os11g14300
Oryza sativa
LOC_Os11g14300
N
0.000
ppa005181m
Prunus persica
ppa005181m
N
0.000
30042.m000490
Ricinus communis
30042.m000490
N
0.000
SB08G007220
Sorghum bicolor
Sb08g007220
N
0.000
GSVIVG00038251001
Vitis vinifera
GSVIVG00038251001
N
0.000
GRMZM2G072339
Zea mays
GRMZM2G072339
N
0.000
GRMZM2G171518
Zea mays
GRMZM2G171518
N
0.000